RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ZHX1-C8orf76Q96EF9 292 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 PHPT1Q9NRX4 125 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-201ENST00000378156 STK16O75716 305 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 CNPP09543 421 aaKnown RBP14.9□□□□□ -0.02
NPHP4-201ENST00000378156 KELP23276 732 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 ZBTB46Q86UZ6 589 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 RASAL3Q86YV0 1011 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 CNTD1Q8N815 330 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 ING5Q8WYH8 240 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 FCRL5Q96RD9 977 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 SLITRK2Q9H156 845 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 OSBPL2Q9H1P3 480 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 IL12AP29459 219 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 AQP4P55087 323 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 CDC42P60953 191 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 RPS24P62847 133 aaKnown RBP14.9□□□□□ -0.02
NPHP4-201ENST00000378156 DNAJB7Q7Z6W7 309 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-201ENST00000378156 SPPL2CQ8IUH8 684 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 RPL10LQ96L21 214 aaKnown RBP14.9□□□□□ -0.02
NPHP4-201ENST00000378156 OR52E6Q96RD3 313 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 TXLNGYQ9BZA5 131 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 EBF3Q9H4W6 596 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 ABCB10Q9NRK6 738 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 RPS6KA6Q9UK32 745 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 ASB3Q9Y575 518 aa14.9□□□□□ -0.02
NPHP4-201ENST00000378156 LOC100506127A0A0U1RQW1 187 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 H0Y858 1186 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 ATG13O75143 517 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 COL6A1P12109 1028 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 INCA1Q0VD86 236 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 QPRTQ15274 297 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 AP5B1Q2VPB7 878 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 LIN52Q52LA3 116 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 DENND5AQ6IQ26 1287 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 FAM124AQ86V42 546 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 NACC2Q96BF6 587 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 OSBPL6Q9BZF3 934 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 EBF2Q9HAK2 575 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 KAT6AQ92794 2004 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 IRS2Q9Y4H2 1338 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 FYNP06241 537 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 CCND3P30281 292 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-201ENST00000378156 WASP42768 502 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 CAPN13Q6MZZ7 669 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-201ENST00000378156 BPIFB6Q8NFQ5 453 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 SIGLEC10Q96LC7 697 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 FERD3LQ96RJ6 166 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 MYH11P35749 1972 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 ADAMTSL3P82987 1691 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 RFXANKO14593 260 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 GOT2P00505 430 aaKnown RBP14.89□□□□□ -0.03
NPHP4-201ENST00000378156 SLC1A2P43004 574 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 ACAP2Q15057 778 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 ZSWIM7Q19AV6 140 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 BHLHB9Q6PI77 547 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 MACC1Q6ZN28 852 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 DEPDC4Q8N2C3 294 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 ZBTB2Q8N680 514 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 UXS1Q8NBZ7 420 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 TWIST2Q8WVJ9 160 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 SMAD5Q99717 465 aaKnown RBP14.89□□□□□ -0.03
NPHP4-201ENST00000378156 CERS4Q9HA82 394 aa14.89□□□□□ -0.03
NPHP4-201ENST00000378156 IMP3Q9NV31 184 aaKnown RBP14.89□□□□□ -0.03
NPHP4-201ENST00000378156 DUS2Q9NX74 493 aaKnown RBP14.89□□□□□ -0.03
NPHP4-201ENST00000378156 FAM47E-STBD1D6RA91 191 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 LRATO95237 230 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 ITPKAP23677 461 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 RAB25P57735 213 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 R3HCC1LQ7Z5L2 792 aaKnown RBP14.88□□□□□ -0.03
NPHP4-201ENST00000378156 TCAIMQ8N3R3 496 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 FEM1CQ96JP0 617 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 MIR1-1HGQ9H1L0 117 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 EPB41L1Q9H4G0 881 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 CYTH4Q9UIA0 394 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 PRDX6P30041 224 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 GJA9P57773 515 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 DPYSQ14117 519 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 KIAA0930Q6ICG6 404 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-201ENST00000378156 C7orf61Q8IZ16 206 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 NARS2Q96I59 477 aaKnown RBP14.88□□□□□ -0.03
NPHP4-201ENST00000378156 HEPHQ9BQS7 1158 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 C16orf70Q9BSU1 422 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 HAPLN2Q9GZV7 340 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 GKN1Q9NS71 199 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 ATP6V1HQ9UI12 483 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 ING4Q9UNL4 249 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 ZNF232Q9UNY5 417 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 PKD1L3Q7Z443 1732 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 TRPM3Q9HCF6 1732 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-201ENST00000378156 URADA6NGE7 173 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 C9IYK1 514 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 H3BNX3 289 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 PRKCHP24723 683 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 GNPDA1P46926 289 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 HCAR3P49019 387 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 ADGRF1Q5T601 910 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 CTU1Q7Z7A3 348 aaKnown RBP14.88□□□□□ -0.03
NPHP4-201ENST00000378156 OSTM1Q86WC4 334 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 C17orf64Q86WR6 236 aa14.88□□□□□ -0.03
NPHP4-201ENST00000378156 ZC3H7AQ8IWR0 971 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms