RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 A0A1B0GTL3 188 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 LOC285095A0A1B0GVY8 99 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 H0Y858 1186 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 BCAS1O75363 584 aaPredicted RBP16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 FGF4P08620 206 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 PRSS56P0CW18 603 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 UMPSP11172 480 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 EFEMP1Q12805 493 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 PIWIL3Q7Z3Z3 882 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 R3HCC1LQ7Z5L2 792 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 ITIH5Q86UX2 942 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 PAPD5Q8NDF8 572 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 STARD8Q92502 1023 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 TMEM125Q96AQ2 219 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 SUSD3Q96L08 255 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 SLC30A3Q99726 388 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 SEMA3CQ99985 751 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 TLR9Q9NR96 1032 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 TMEM248Q9NWD8 314 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 ZNF639Q9UID6 485 aa16.45■□□□□ 0.22
PCDHA1-201ENST00000378133 ZNF623O75123 536 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 PABPC1P11940 636 aaKnown RBP16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 HGFP14210 728 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 ZNF37AP17032 561 aaPredicted RBP16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 APLP1P51693 650 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 ECT2LQ008S8 904 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 LIPEQ05469 1076 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 GALNT3Q14435 633 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 RAB44Q7Z6P3 723 aaPredicted RBP16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 MON1AQ86VX9 555 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 PHYKPLQ8IUZ5 450 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 SPARTQ8N0X7 666 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 TEX26Q8N6G2 289 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 GPR152Q8TDT2 470 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 OSCP1Q8WVF1 389 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 SGCDQ92629 289 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 RNF145Q96MT1 663 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 ADAM2Q99965 735 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 FUNDC2Q9BWH2 189 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 CHID1Q9BWS9 393 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 A0A0U1RQF3 1178 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 GSTM2P28161 218 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 THPOP40225 353 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 AQP6Q13520 282 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 NFYCQ13952 458 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 CBX2Q14781 532 aaPredicted RBP16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 DEPDC1Q5TB30 811 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 RAP1GAP2Q684P5 730 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 TMEM214Q6NUQ4 689 aaKnown RBP16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 FBXL22Q6P050 247 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 MSANTD2Q6P1R3 559 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 ZNF641Q96N77 438 aaPredicted RBP16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 MUC13Q9H3R2 512 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 FNIP2Q9P278 1114 aa16.44■□□□□ 0.22
PCDHA1-201ENST00000378133 HMBSP08397 361 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 CRHBPP24387 322 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 GRK4P32298 578 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 POLD3Q15054 466 aaPredicted RBP16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 SPATS1Q496A3 300 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 MIB1Q86YT6 1006 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 SNX29P2Q8IUI4 249 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 DCP1BQ8IZD4 617 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 BIRC7Q96CA5 298 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 PSD2Q9BQI7 771 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 HERC2P3Q9BVR0 1158 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 TRIM54Q9BYV2 358 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 WDR12Q9GZL7 423 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 KLHL25Q9H0H3 589 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 RBMX2Q9Y388 322 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 PCDHGA11Q9Y5H2 935 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 MYO16Q9Y6X6 1858 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 TNPO2O14787 897 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 MUSKO15146 869 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 ACVRL1P37023 503 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 FOXM1Q08050 763 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 MGAT3Q09327 533 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 KCNJ8Q15842 424 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 AASDHQ4L235 1098 aaPredicted RBP16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 PYCR3Q53H96 274 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 MRNIPQ6NTE8 343 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 THAP5Q7Z6K1 395 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 PTRH1Q86Y79 214 aaKnown RBP16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 SLC7A5P1Q8MH63 180 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 FKBP10Q96AY3 582 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 ATOH8Q96SQ7 321 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 DGCR6LQ9BY27 220 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 SEMA4BQ9NPR2 832 aaPredicted RBP16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 POLG2Q9UHN1 485 aa16.43■□□□□ 0.22
PCDHA1-201ENST00000378133 C16orf96A6NNT2 1141 aa16.42■□□□□ 0.22
PCDHA1-201ENST00000378133 JRKO75564 520 aa16.42■□□□□ 0.22
PCDHA1-201ENST00000378133 LBPP18428 481 aa16.42■□□□□ 0.22
PCDHA1-201ENST00000378133 ARSFP54793 590 aa16.42■□□□□ 0.22
PCDHA1-201ENST00000378133 DIO3P55073 304 aa16.42■□□□□ 0.22
PCDHA1-201ENST00000378133 TRIM32Q13049 653 aa16.42■□□□□ 0.22
PCDHA1-201ENST00000378133 SKIV2LQ15477 1246 aaKnown RBP16.42■□□□□ 0.22
PCDHA1-201ENST00000378133 RBM48Q5RL73 367 aaKnown RBP16.42■□□□□ 0.22
PCDHA1-201ENST00000378133 KANK2Q63ZY3 851 aa16.42■□□□□ 0.22
PCDHA1-201ENST00000378133 RGMBQ6NW40 437 aa16.42■□□□□ 0.22
PCDHA1-201ENST00000378133 BLOC1S3Q6QNY0 202 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms