RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 GRB7Q14451 532 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 OR4D1Q15615 310 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 XKR4Q5GH76 650 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 SNAP47Q5SQN1 464 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 TMEM220Q6QAJ8 160 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 TMEM135Q86UB9 458 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 OR13J1Q8NGT2 312 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 NKX2-4Q9H2Z4 354 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 XKR8Q9H6D3 395 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 FARSBQ9NSD9 589 aaKnown RBP8.02□□□□□ -1.13
CKAP2-203ENST00000378037 SLC7A8Q9UHI5 535 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 OR1A2Q9Y585 309 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 F8W8V4 182 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 NRG2O14511 850 aaPredicted RBP8.02□□□□□ -1.13
CKAP2-203ENST00000378037 CLIC3O95833 236 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 ASGR2P07307 311 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 CNTFP26441 200 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 BDKRB1P46663 353 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 POLD2P49005 469 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 CLCN5P51795 746 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 ENPEPQ07075 957 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 MPPE1Q53F39 396 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 XKR6Q5GH73 641 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 RABL3Q5HYI8 236 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 AFTPHQ6ULP2 937 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 BHLHA9Q7RTU4 235 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 OR2AP1Q8NGE2 309 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 TPD52L3Q96J77 140 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 ADNPQ9H2P0 1102 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 FAM83DQ9H4H8 585 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 PLAC1Q9HBJ0 212 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 KCNK4Q9NYG8 393 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 CLCA2Q9UQC9 943 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 ACTL7BQ9Y614 415 aa8.02□□□□□ -1.13
CKAP2-203ENST00000378037 A0A1B0GTL3 188 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 DIRAS1O95057 198 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 FSBPO95073 299 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 TIMP1P01033 207 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 ACP5P13686 325 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 HMGA1P17096 107 aaKnown RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 HOXD9P28356 352 aaPredicted RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 TTPAP49638 278 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 HTR6P50406 440 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 IHHQ14623 411 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 MTX3Q5HYI7 312 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 CES5AQ6NT32 575 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 ADGRD2Q7Z7M1 963 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 TMPRSS6Q8IU80 811 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 SPPL2CQ8IUH8 684 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 HMGB4Q8WW32 186 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 RLN3Q8WXF3 142 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 FOPNLQ96NB1 174 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 CIB1Q99828 191 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 TSEN34Q9BSV6 310 aaKnown RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 SUV39H2Q9H5I1 410 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 CYLDQ9NQC7 956 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 NSMCE4AQ9NXX6 385 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 STOX2Q9P2F5 926 aaPredicted RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 GGA2Q9UJY4 613 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 RAP2CQ9Y3L5 183 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 A0A0J9YYE9 177 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 KPNA5O15131 536 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 NME6O75414 186 aaPredicted RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 XRCC1P18887 633 aaPredicted RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 FUT4P22083 530 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 CYP51A1Q16850 503 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 DUS1LQ6P1R4 473 aaKnown RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 PRSS58Q8IYP2 241 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 ADAMTS19Q8TE59 1207 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 C19orf60Q96EN9 201 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 SOX17Q9H6I2 414 aaPredicted RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 DNMT3BQ9UBC3 853 aaKnown RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 CNOT6Q9ULM6 557 aaKnown RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 ATXN2Q99700 1313 aaKnown RBP8.01□□□□□ -1.13
CKAP2-203ENST00000378037 SCN2AQ99250 2005 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 GLOD5A6NK44 160 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 MAN1A2O60476 641 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 TBX10O75333 385 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 THRAP10827 490 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 CKMT2P17540 419 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 NR4A1P22736 598 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 POU1F1P28069 291 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 THOP1P52888 689 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 SGCGQ13326 291 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 SHHQ15465 462 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 PHKG1Q16816 387 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 TTLL9Q3SXZ7 439 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 IL23RQ5VWK5 629 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 RNF43Q68DV7 783 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 FAM45BPQ6NSW5 357 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 PARGQ86W56 976 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 TDRPQ86YL5 185 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 DSELQ8IZU8 1212 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 UMODL1-AS1Q8N2C9 162 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 KCT2Q8NC54 265 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 ARRDC2Q8TBH0 407 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 FAM45AQ8TCE6 357 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 STYXQ8WUJ0 223 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 DNAJA3Q96EY1 480 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 PSKH2Q96QS6 385 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms