RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GPR150Q8NGU9 434 aa13.05□□□□□ -0.32
CKAP2-202ENST00000378034 ZNF669Q96BR6 464 aaPredicted RBP13.05□□□□□ -0.32
CKAP2-202ENST00000378034 LINC00615Q96LM1 132 aaPredicted RBP13.05□□□□□ -0.32
CKAP2-202ENST00000378034 LRRC1Q9BTT6 524 aa13.05□□□□□ -0.32
CKAP2-202ENST00000378034 DPH5Q9H2P9 285 aa13.05□□□□□ -0.32
CKAP2-202ENST00000378034 DPEP2Q9H4A9 486 aa13.05□□□□□ -0.32
CKAP2-202ENST00000378034 APOBEC2Q9Y235 224 aaKnown RBP13.05□□□□□ -0.32
CKAP2-202ENST00000378034 PLEKHM1Q9Y4G2 1056 aa13.05□□□□□ -0.32
CKAP2-202ENST00000378034 ST14Q9Y5Y6 855 aa13.05□□□□□ -0.32
CKAP2-202ENST00000378034 FAM169AQ9Y6X4 670 aa13.05□□□□□ -0.32
CKAP2-202ENST00000378034 ZFC3H1O60293 1989 aaKnown RBP13.04□□□□□ -0.32
CKAP2-202ENST00000378034 BPTFQ12830 3046 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 PFDN6O15212 129 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 PRSS56P0CW18 603 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 SLC2A4P14672 509 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 ARCN1P48444 511 aaKnown RBP13.04□□□□□ -0.32
CKAP2-202ENST00000378034 PRLHRP49683 370 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 CTSCP53634 463 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 SIM1P81133 766 aaPredicted RBP13.04□□□□□ -0.32
CKAP2-202ENST00000378034 DMPKQ09013 629 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 TCEA2Q15560 299 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 BBS9Q3SYG4 887 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 CES3Q6UWW8 571 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 SDCCAG8Q86SQ7 713 aaPredicted RBP13.04□□□□□ -0.32
CKAP2-202ENST00000378034 AMZ2Q86W34 360 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 LMNTD2Q8IXW0 634 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 SLC35F3Q8IY50 421 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 GPR156Q8NFN8 814 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 ZDHHC1Q8WTX9 485 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 SEC14L1Q92503 715 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 NAT6Q93015 286 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 SGF29Q96ES7 293 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 TCF12Q99081 682 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 PHACTR1Q9C0D0 580 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 VPS37BQ9H9H4 285 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 KLC4Q9NSK0 619 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 SPATS2LQ9NUQ6 558 aaKnown RBP13.04□□□□□ -0.32
CKAP2-202ENST00000378034 GRHL1Q9NZI5 618 aa13.04□□□□□ -0.32
CKAP2-202ENST00000378034 LY6G6EA0A0G2JKS1 128 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 ZCWPW2A0A1B0GU75 182 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 SPAARA0A1B0GVQ0 90 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 PRR19A6NJB7 356 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 OR2AG2A6NM03 316 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 E7ESA3 106 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 GIPC1O14908 333 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 EIF3HO15372 352 aaKnown RBP eCLIP13.03□□□□□ -0.32
CKAP2-202ENST00000378034 POP7O75817 140 aaKnown RBP13.03□□□□□ -0.32
CKAP2-202ENST00000378034 GP1BAP07359 652 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 ARNTP27540 789 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 MSS51Q4VC12 460 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 SPANXN3Q5MJ09 141 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 CENPUQ71F23 418 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 C17orf82Q86X59 251 aaPredicted RBP13.03□□□□□ -0.32
CKAP2-202ENST00000378034 GABPB2Q8TAK5 448 aaPredicted RBP13.03□□□□□ -0.32
CKAP2-202ENST00000378034 ART4Q93070 314 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 FCRL3Q96P31 734 aaPredicted RBP13.03□□□□□ -0.32
CKAP2-202ENST00000378034 FAM129AQ9BZQ8 928 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 FOXP3Q9BZS1 431 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 SLC23A2Q9UGH3 650 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 PADI4Q9UM07 663 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 KCNK6Q9Y257 313 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 U3KQA8 63 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 C17orf113A0A1B0GUU1 675 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 EME2A4GXA9 379 aaPredicted RBP13.03□□□□□ -0.32
CKAP2-202ENST00000378034 MGAT4DA6NG13 374 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 OR5K4A6NMS3 321 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 ESPNB1AK53 854 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 SGTAO43765 313 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 NOBOXO60393 691 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 DKK1O94907 266 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 OGNP20774 298 aaKnown RBP13.03□□□□□ -0.32
CKAP2-202ENST00000378034 IDSP22304 550 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 ACADVLP49748 655 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 LONRF1Q17RB8 773 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 C14orf28Q4W4Y0 310 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 RNF187Q5TA31 235 aaPredicted RBP13.03□□□□□ -0.32
CKAP2-202ENST00000378034 AGAP9Q5VTM2 703 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 WASH2PQ6VEQ5 465 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 DET1Q7L5Y6 550 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 LRRC6Q86X45 466 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 AVL9Q8NBF6 648 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 KYQ8NBH2 561 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.03□□□□□ -0.32
CKAP2-202ENST00000378034 NOA1Q8NC60 698 aaKnown RBP13.03□□□□□ -0.32
CKAP2-202ENST00000378034 OR2L2Q8NH16 312 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 CALML6Q8TD86 181 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 L2HGDHQ9H9P8 463 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 WASH6PQ9NQA3 447 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 TOR4AQ9NXH8 423 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 GULP1Q9UBP9 304 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 VPS9D1Q9Y2B5 631 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 TEX264Q9Y6I9 313 aa13.03□□□□□ -0.32
CKAP2-202ENST00000378034 SPTBN4Q9H254 2564 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 B4DGG1 531 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 TRIM16O95361 564 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 OR56A5P0C7T3 313 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 FTH1P19P0C7X4 201 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 F3P13726 295 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 PMLP29590 882 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 ELK3P41970 407 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms