RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 CROTQ9UKG9 612 aa21.43■■□□□ 1.02
RNF39-202ENST00000376751 BNIP3LO60238 219 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 OR4F21O95013 312 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 UROSP10746 265 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 CRTC1Q6UUV9 634 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 TMEM25Q86YD3 366 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 LILRA2Q8N149 483 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 ASB9Q96DX5 294 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 CDK15Q96Q40 435 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 ZNF382Q96SR6 550 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 SPAG4Q9NPE6 437 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 C6orf203Q9P0P8 240 aaPredicted RBP21.42■■□□□ 1.02
RNF39-202ENST00000376751 TMEM181Q9P2C4 612 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 MAP10Q9P2G4 905 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 RIMS3Q9UJD0 308 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 SLC4A7Q9Y6M7 1214 aa21.42■■□□□ 1.02
RNF39-202ENST00000376751 SPAM1P38567 509 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 GJA8P48165 433 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 ERVPABLB-1P60509 514 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 NAA20P61599 178 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 MYLK3Q32MK0 819 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 VPS26BQ4G0F5 336 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 OGFOD2Q6N063 350 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 GPR26Q8NDV2 337 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 GATA6Q92908 595 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 CLP1Q92989 425 aaKnown RBP21.41■■□□□ 1.02
RNF39-202ENST00000376751 TCF25Q9BQ70 676 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 APPL1Q9UKG1 709 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 HS3ST2Q9Y278 367 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 GPR45Q9Y5Y3 372 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 NOTCH4Q99466 2003 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 PRSS51A0A1B0GVH4 220 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 VPS4BO75351 444 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 MOSPD3O75425 235 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 MATN4O95460 622 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 CYBBP04839 570 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 ADGRE1Q14246 886 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 TRIM25Q14258 630 aaKnown RBP21.41■■□□□ 1.02
RNF39-202ENST00000376751 LETMD1Q6P1Q0 360 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 ZFP1Q6P2D0 407 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 TMEM154Q6P9G4 183 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 RFLNAQ6ZTI6 216 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 FRA10AC1Q70Z53 315 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 ADAMTSL2Q86TH1 951 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 METTL3Q86U44 580 aaKnown RBP21.41■■□□□ 1.02
RNF39-202ENST00000376751 SPATA24Q86W54 205 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 CDYL2Q8N8U2 506 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 VCX3BQ9H321 246 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 IL23AQ9NPF7 189 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 SLC52A3Q9NQ40 469 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 CRLS1Q9UJA2 301 aa21.41■■□□□ 1.02
RNF39-202ENST00000376751 BBIP1A8MTZ0 92 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 RFPL2O75678 378 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 SLC25A14O95258 325 aaPredicted RBP21.4■■□□□ 1.02
RNF39-202ENST00000376751 TRIM16O95361 564 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 GLUD1P00367 558 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 SLC7A2P52569 658 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 SNRPD1P62314 119 aaKnown RBP21.4■■□□□ 1.02
RNF39-202ENST00000376751 TEAD2Q15562 447 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 C6orf10Q5SRN2 563 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 PLPP4Q5VZY2 271 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 NXPE1Q8N323 547 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 ZNF784Q8NCA9 323 aaPredicted RBP21.4■■□□□ 1.02
RNF39-202ENST00000376751 DLG3Q92796 817 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 ECHDC3Q96DC8 303 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 LYSMD1Q96S90 227 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 C19orf43Q9BQ61 176 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 COPS7BQ9H9Q2 264 aaPredicted RBP21.4■■□□□ 1.02
RNF39-202ENST00000376751 ELOVL2Q9NXB9 296 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 BCAP29Q9UHQ4 241 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 ST14Q9Y5Y6 855 aa21.4■■□□□ 1.02
RNF39-202ENST00000376751 GOLGA8CPA6NN73 597 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 PEX1O43933 1283 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 DNAJA2O60884 412 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 CHRM1P11229 460 aaPredicted RBP21.39■■□□□ 1.02
RNF39-202ENST00000376751 IDO1P14902 403 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 LHCGRP22888 699 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 ZFP36L2P47974 494 aaKnown RBP21.39■■□□□ 1.02
RNF39-202ENST00000376751 PCBP2Q15366 365 aaKnown RBP eCLIP21.39■■□□□ 1.02
RNF39-202ENST00000376751 GRAMD1BQ3KR37 738 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 LRRC66Q68CR7 880 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 GRAMD4Q6IC98 578 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 GOLGA7Q7Z5G4 137 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 CBARPQ8N350 705 aaPredicted RBP21.39■■□□□ 1.02
RNF39-202ENST00000376751 PLCD3Q8N3E9 789 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 PPP2R3CQ969Q6 453 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 ROPN1LQ96C74 230 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 TEX37Q96LM6 180 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 GPATCH1Q9BRR8 931 aaKnown RBP21.39■■□□□ 1.02
RNF39-202ENST00000376751 NOL11Q9H8H0 719 aaKnown RBP21.39■■□□□ 1.02
RNF39-202ENST00000376751 IL1RL2Q9HB29 575 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 AIG1Q9NVV5 245 aa21.39■■□□□ 1.02
RNF39-202ENST00000376751 DPPA5A6NC42 116 aa21.39■■□□□ 1.01
RNF39-202ENST00000376751 FXYD1O00168 92 aa21.39■■□□□ 1.01
RNF39-202ENST00000376751 OR7A17O14581 309 aa21.39■■□□□ 1.01
RNF39-202ENST00000376751 UBTFL6P0CB48 400 aaPredicted RBP21.39■■□□□ 1.01
RNF39-202ENST00000376751 HTR6P50406 440 aa21.39■■□□□ 1.01
RNF39-202ENST00000376751 GSTA3Q16772 222 aa21.39■■□□□ 1.01
RNF39-202ENST00000376751 EFL1Q7Z2Z2 1120 aaKnown RBP21.39■■□□□ 1.01
RNF39-202ENST00000376751 ADGRG2Q8IZP9 1017 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms