RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CLCA4Q14CN2 919 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 PPP2R5EQ16537 467 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 GLT6D1Q7Z4J2 308 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 TMTC1Q8IUR5 882 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 ZNF567Q8N184 647 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 TTC30BQ8N4P2 665 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 IPMKQ8NFU5 416 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 BRSK1Q8TDC3 778 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 BLOC1S5Q8TDH9 187 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 CXorf40BQ96DE9 158 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 OXNAD1Q96HP4 312 aaPredicted RBP20.69■□□□□ 0.9
VSX1-201ENST00000376707 RBM41Q96IZ5 413 aaKnown RBP20.69■□□□□ 0.9
VSX1-201ENST00000376707 MRGPRX2Q96LB1 330 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 TGM7Q96PF1 710 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 EFHD1Q9BUP0 239 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 SPRY4Q9C004 299 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 ZCCHC2Q9C0B9 1178 aaKnown RBP20.69■□□□□ 0.9
VSX1-201ENST00000376707 TRIT1Q9H3H1 467 aaKnown RBP20.69■□□□□ 0.9
VSX1-201ENST00000376707 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.69■□□□□ 0.9
VSX1-201ENST00000376707 TRIM10Q9UDY6 481 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 SLC30A1Q9Y6M5 507 aa20.69■□□□□ 0.9
VSX1-201ENST00000376707 PRR19A6NJB7 356 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 SOWAHDA6NJG2 315 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 OR52A4PA6NMU1 304 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 HACD1B0YJ81 288 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 PPFIA2O75334 1257 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 BRAFP15056 766 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 FOXM1Q08050 763 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 AGAP9Q5VTM2 703 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 FAM151BQ6UXP7 276 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 WASH2PQ6VEQ5 465 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 TIPARPQ7Z3E1 657 aaKnown RBP20.68■□□□□ 0.9
VSX1-201ENST00000376707 RBM12BQ8IXT5 1001 aaKnown RBP20.68■□□□□ 0.9
VSX1-201ENST00000376707 KRT35Q92764 455 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 SLC45A3Q96JT2 553 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 QKIQ96PU8 341 aaKnown RBP eCLIP20.68■□□□□ 0.9
VSX1-201ENST00000376707 WASH6PQ9NQA3 447 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 GEMIN8Q9NWZ8 242 aaKnown RBP20.68■□□□□ 0.9
VSX1-201ENST00000376707 IL17CQ9P0M4 197 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 RSPH14Q9UHP6 348 aa20.68■□□□□ 0.9
VSX1-201ENST00000376707 TMEM184BQ9Y519 407 aaPredicted RBP20.68■□□□□ 0.9
VSX1-201ENST00000376707 LOC101059948A0A1B0GTJ6 334 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 RCCD1A6NED2 376 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 TOX3O15405 576 aaPredicted RBP20.67■□□□□ 0.9
VSX1-201ENST00000376707 RASSF9O75901 435 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 HLA-DPA1P20036 260 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 CTNNA1P35221 906 aaKnown RBP20.67■□□□□ 0.9
VSX1-201ENST00000376707 HALP42357 657 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 NFKB2Q00653 900 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 ABHD18Q0P651 414 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 MPP3Q13368 585 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 SLC1A5Q15758 541 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 CHRNA6Q15825 494 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 BBS12Q6ZW61 710 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 C11orf96Q7Z7L8 435 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 DAAM2Q86T65 1068 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 UNC5BQ8IZJ1 945 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 DTX3LQ8TDB6 740 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 CATSPER2Q96P56 530 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 FSD1LQ9BXM9 530 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 SLC25A18Q9H1K4 315 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 ADNPQ9H2P0 1102 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 SLC40A1Q9NP59 571 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 SIDT1Q9NXL6 827 aaKnown RBP20.67■□□□□ 0.9
VSX1-201ENST00000376707 TRHDEQ9UKU6 1024 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 PKP3Q9Y446 797 aa20.67■□□□□ 0.9
VSX1-201ENST00000376707 GLYATL1P3A0A0U1RQE8 302 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 BTNL10A8MVZ5 291 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 BUD23O43709 281 aaKnown RBP20.66■□□□□ 0.9
VSX1-201ENST00000376707 UGT1A9O60656 530 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 KCNJ13O60928 360 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 UGT1A6P19224 532 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 UGT1A1P22309 533 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 UGT1A4P22310 534 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 LEPRP48357 1165 aaKnown RBP20.66■□□□□ 0.9
VSX1-201ENST00000376707 SEPHS1P49903 392 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 COPS2P61201 443 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 ITGA9Q13797 1035 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 GPR18Q14330 331 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 LDLRAP1Q5SW96 308 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 CCDC181Q5TID7 509 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 AMZ2Q86W34 360 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 RSC1A1Q92681 617 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 HEMGNQ9BXL5 484 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 CLMPQ9H6B4 373 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 UGT1A7Q9HAW7 530 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 UGT1A10Q9HAW8 530 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 UGT1A8Q9HAW9 530 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 EFR3BQ9Y2G0 817 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 REXO2Q9Y3B8 237 aaKnown RBP20.66■□□□□ 0.9
VSX1-201ENST00000376707 PCDHA3Q9Y5H8 950 aa20.66■□□□□ 0.9
VSX1-201ENST00000376707 H7C0C1 242 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 APOC4-APOC2K7ER74 178 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 NKX2-8O15522 239 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 IPO7O95373 1038 aaKnown RBP20.65■□□□□ 0.9
VSX1-201ENST00000376707 WISP1O95388 367 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 DLGAP3O95886 979 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 APOC2P02655 101 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 PRKAR1AP10644 381 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 CCR10P46092 362 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms