RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 CDK3Q00526 305 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 CTBSQ01459 385 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 ABHD18Q0P651 414 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 CDC20Q12834 499 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 PTPRRQ15256 657 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 PARP6Q2NL67 630 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 CCDC137Q6PK04 289 aaKnown RBP12.03□□□□□ -0.48
LSM2-208ENST00000375661 SLC30A9Q6PML9 568 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 CBARPQ8N350 705 aaPredicted RBP12.03□□□□□ -0.48
LSM2-208ENST00000375661 BMPERQ8N8U9 685 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 OR10G6Q8NH81 332 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 APOBEC4Q8WW27 367 aaKnown RBP12.03□□□□□ -0.48
LSM2-208ENST00000375661 DTD2Q96FN9 168 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 SCARF2Q96GP6 870 aaPredicted RBP12.03□□□□□ -0.48
LSM2-208ENST00000375661 SPRY4Q9C004 299 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 DDX47Q9H0S4 455 aaKnown RBP12.03□□□□□ -0.48
LSM2-208ENST00000375661 PCDH9Q9HC56 1237 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 KCNK4Q9NYG8 393 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 SUFUQ9UMX1 484 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 MAN2B2Q9Y2E5 1009 aa12.03□□□□□ -0.48
LSM2-208ENST00000375661 GOLGA6L10A0A0M3HER8 536 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 LOC285095A0A1B0GVY8 99 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 EFCAB7A8K855 629 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 DUX1O43812 170 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 HEXIM1O94992 359 aaKnown RBP12.02□□□□□ -0.49
LSM2-208ENST00000375661 CPP00450 1065 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 CYP2A6P11509 494 aaPredicted RBP12.02□□□□□ -0.49
LSM2-208ENST00000375661 ADCY8P40145 1251 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 FNTAP49354 379 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 WNT3AP56704 352 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 MC2RQ01718 297 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 CDK18Q07002 472 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 DPTQ07507 201 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 MPP3Q13368 585 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 IGFBP7Q16270 282 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 CNGA3Q16281 694 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 PCSK7Q16549 785 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 QPCTQ16769 361 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 NKAIN2Q5VXU1 208 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 ANKS6Q68DC2 871 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 CEACAM20Q6UY09 585 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 ARHGEF18Q6ZSZ5 1173 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 KDELC2Q7Z4H8 507 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 FAM129CQ86XR2 697 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 TAB3Q8N5C8 712 aaPredicted RBP12.02□□□□□ -0.49
LSM2-208ENST00000375661 IPMKQ8NFU5 416 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 PATE1Q8WXA2 126 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 ZNF592Q92610 1267 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 AHCYL2Q96HN2 611 aaKnown RBP12.02□□□□□ -0.49
LSM2-208ENST00000375661 PSMG3-AS1Q96PY0 264 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 FBXO8Q9NRD0 319 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 OCIAD1Q9NX40 245 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 CDC23Q9UJX2 597 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 NEU2Q9Y3R4 380 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 TMEM184BQ9Y519 407 aaPredicted RBP12.02□□□□□ -0.49
LSM2-208ENST00000375661 ZNF106Q9H2Y7 1883 aaKnown RBP12.02□□□□□ -0.49
LSM2-208ENST00000375661 FLNCQ14315 2725 aa12.02□□□□□ -0.49
LSM2-208ENST00000375661 A0A0J9YYE9 177 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 A8MX80 341 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 ANKRD66B4E2M5 251 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 NKX2-8O15522 239 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 URI1O94763 535 aaPredicted RBP12.01□□□□□ -0.49
LSM2-208ENST00000375661 TRBC1P01850 177 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 PYGLP06737 847 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 CTPS1P17812 591 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 CA4P22748 312 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 ADRA1AP35348 466 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 ACTR1BP42025 376 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 PTGIRP43119 386 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 CD97P48960 835 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 GEMP55040 296 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 ACTR1AP61163 376 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 RPL26P61254 145 aaKnown RBP12.01□□□□□ -0.49
LSM2-208ENST00000375661 KLRB1Q12918 225 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 OLIG2Q13516 323 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 LRP8Q14114 963 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 SEPT6Q14141 434 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 MAP7Q14244 749 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 GALNT3Q14435 633 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 PRPSAP1Q14558 356 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 TRIP13Q15645 432 aaPredicted RBP12.01□□□□□ -0.49
LSM2-208ENST00000375661 LACTB2Q53H82 288 aaPredicted RBP12.01□□□□□ -0.49
LSM2-208ENST00000375661 KCTD11Q693B1 232 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 RAET1GQ6H3X3 334 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 WDR74Q6RFH5 385 aaPredicted RBP12.01□□□□□ -0.49
LSM2-208ENST00000375661 ARHGAP22Q7Z5H3 698 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 NRSN1Q8IZ57 195 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 CCDC89Q8N998 374 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 LPCAT1Q8NF37 534 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 SCRN2Q96FV2 425 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 ABHD17AQ96GS6 310 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 OR2M4Q96R27 311 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 MCCC1Q96RQ3 725 aaPredicted RBP12.01□□□□□ -0.49
LSM2-208ENST00000375661 SLC38A3Q99624 504 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 SUDS3Q9H7L9 328 aaPredicted RBP12.01□□□□□ -0.49
LSM2-208ENST00000375661 ETNK1Q9HBU6 452 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 ZNF71Q9NQZ8 489 aaPredicted RBP12.01□□□□□ -0.49
LSM2-208ENST00000375661 PAK5Q9P286 719 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 RPL26L1Q9UNX3 145 aaKnown RBP12.01□□□□□ -0.49
LSM2-208ENST00000375661 AAR2Q9Y312 384 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms