RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 OR52A4PA6NMU1 304 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 RAD1O60671 282 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 AGTP01019 485 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 LIFP15018 202 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 AMD1P17707 334 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 HLA-DPA1P20036 260 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 SPAM1P38567 509 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 GFERP55789 205 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 XRCC4Q13426 336 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 GTF2H3Q13889 308 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 CLCA4Q14CN2 919 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 SDK2Q58EX2 2172 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 FAM151BQ6UXP7 276 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 CEACAM20Q6UY09 585 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 WASH2PQ6VEQ5 465 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 ZPBPQ9BS86 351 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 FSD1LQ9BXM9 530 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 SLC12A9Q9BXP2 914 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 SLC40A1Q9NP59 571 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 WASH6PQ9NQA3 447 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 OGFRQ9NZT2 677 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 PKP3Q9Y446 797 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 EPN1Q9Y6I3 576 aaPredicted RBP13.99□□□□□ -0.17
NELFE-201ENST00000375425 DUSP10Q9Y6W6 482 aa13.99□□□□□ -0.17
NELFE-201ENST00000375425 GLYATL1P3A0A0U1RQE8 302 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 SOWAHDA6NJG2 315 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 J3QKU1 62 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 POLR1CO15160 346 aaPredicted RBP13.98□□□□□ -0.17
NELFE-201ENST00000375425 GPR39O43194 453 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 NDUFA10O95299 355 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 C9P02748 559 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 FAM87AP0C7U9 286 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 VCLP18206 1134 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 CA5AP35218 305 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 COPS2P61201 443 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 NFATC3Q12968 1075 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 PTPRCAPQ14761 206 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 LDLRAP1Q5SW96 308 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 CCDC181Q5TID7 509 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 AGAP9Q5VTM2 703 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 NLGN4XQ8N0W4 816 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 RASGEF1AQ8N9B8 481 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 NLGN4YQ8NFZ3 816 aaPredicted RBP13.98□□□□□ -0.17
NELFE-201ENST00000375425 CXorf40BQ96DE9 158 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 C9orf72Q96LT7 481 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 TGM7Q96PF1 710 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 PANX2Q96RD6 677 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 POT1Q9NUX5 634 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 WDR37Q9Y2I8 494 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 PCDHA3Q9Y5H8 950 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 MN1Q10571 1320 aaPredicted RBP13.98□□□□□ -0.17
NELFE-201ENST00000375425 GAPDHSO14556 408 aaPredicted RBP13.98□□□□□ -0.17
NELFE-201ENST00000375425 CAPN5O15484 640 aaPredicted RBP13.98□□□□□ -0.17
NELFE-201ENST00000375425 KCNJ13O60928 360 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 PPFIA2O75334 1257 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 POP7O75817 140 aaKnown RBP13.98□□□□□ -0.17
NELFE-201ENST00000375425 ANKRD34CP0C6C1 535 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 MAP4P27816 1152 aaKnown RBP13.98□□□□□ -0.17
NELFE-201ENST00000375425 CTNNA1P35221 906 aaKnown RBP13.98□□□□□ -0.17
NELFE-201ENST00000375425 SEPHS1P49903 392 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 CTSCP53634 463 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 NAP1L1P55209 391 aaKnown RBP13.98□□□□□ -0.17
NELFE-201ENST00000375425 ITGA9Q13797 1035 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 GPRC6AQ5T6X5 926 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 TMEM220Q6QAJ8 160 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 TIPARPQ7Z3E1 657 aaKnown RBP13.98□□□□□ -0.17
NELFE-201ENST00000375425 AMZ2Q86W34 360 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 ACTL9Q8TC94 416 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 EFR3BQ9Y2G0 817 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 ARL5AQ9Y689 179 aa13.98□□□□□ -0.17
NELFE-201ENST00000375425 TENM4Q6N022 2769 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 OR2AG2A6NM03 316 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 STX7O15400 261 aaKnown RBP13.97□□□□□ -0.17
NELFE-201ENST00000375425 ANXA9O76027 345 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 STK17BO94768 372 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 ITGB6P18564 788 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 LEPRP48357 1165 aaKnown RBP13.97□□□□□ -0.17
NELFE-201ENST00000375425 ZNF75DP51815 510 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 GEMP55040 296 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 OTUD4Q01804 1114 aaKnown RBP13.97□□□□□ -0.17
NELFE-201ENST00000375425 FOXM1Q08050 763 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 GPR18Q14330 331 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 TMTC1Q8IUR5 882 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 RBM12BQ8IXT5 1001 aaKnown RBP13.97□□□□□ -0.17
NELFE-201ENST00000375425 UNC5BQ8IZJ1 945 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 DDHD1Q8NEL9 900 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 ZNF398Q8TD17 642 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 CALR3Q96L12 384 aaKnown RBP13.97□□□□□ -0.17
NELFE-201ENST00000375425 FERMT1Q9BQL6 677 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 GORASP1Q9BQQ3 440 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 FICDQ9BVA6 458 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 OSBPL8Q9BZF1 889 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 ZCCHC2Q9C0B9 1178 aaKnown RBP13.97□□□□□ -0.17
NELFE-201ENST00000375425 GBA3Q9H227 469 aa13.97□□□□□ -0.17
NELFE-201ENST00000375425 TMEM184BQ9Y519 407 aaPredicted RBP13.97□□□□□ -0.17
NELFE-201ENST00000375425 DNMT3AQ9Y6K1 912 aaPredicted RBP13.97□□□□□ -0.17
NELFE-201ENST00000375425 LOC101059948A0A1B0GTJ6 334 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 MACROD2A1Z1Q3 448 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 C2orf81A6NN90 581 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 TOX3O15405 576 aaPredicted RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms