RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SRRDQ9UH36 339 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 TINAGQ9UJW2 476 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 ANGEL1Q9UNK9 670 aaKnown RBP8.94□□□□□ -0.98
UBR4-201ENST00000375218 F8VP50 259 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 K7ESF4 209 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 UGT2B4P06133 528 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 SPAM1P38567 509 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 PEX3P56589 373 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 FOXM1Q08050 763 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 ABRQ12979 859 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 DAG1Q14118 895 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 NADK2Q4G0N4 442 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 WBP2NLQ6ICG8 309 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 TRIM69Q86WT6 500 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 FMR1NBQ8N0W7 255 aaPredicted RBP8.94□□□□□ -0.98
UBR4-201ENST00000375218 ALLCQ8N6M5 410 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 C17orf47Q8NEP4 570 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 MRPL38Q96DV4 380 aaKnown RBP8.94□□□□□ -0.98
UBR4-201ENST00000375218 C16orf58Q96GQ5 468 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 C11orf70Q9BRQ4 267 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 SUGCTQ9HAC7 445 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 FAM105AQ9NUU6 356 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 RIC8BQ9NVN3 520 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 HIF1ANQ9NWT6 349 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 ASPMQ8IZT6 3477 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 ELP1O95163 1332 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 E9PI62 339 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 CTDSP2O14595 271 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 ZNF185O15231 689 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 HCRTR2O43614 444 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 KLKB1P03952 638 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 POU1F1P28069 291 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 CD1BP29016 333 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 PRMT2P55345 433 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 VEZF1Q14119 521 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 TYSND1Q2T9J0 566 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 PCID2Q5JVF3 399 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 HES5Q5TA89 166 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 LRRC38Q5VT99 294 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 USP17L6PQ6QN14 398 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 SHISA2Q6UWI4 295 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 APTXQ7Z2E3 356 aaKnown RBP8.94□□□□□ -0.98
UBR4-201ENST00000375218 LINC00518Q8N0U6 118 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 LINC00301Q8NCQ3 95 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 TMIEQ8NEW7 156 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 ANGPTL6Q8NI99 470 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 MYRFLQ96LU7 910 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 MTG1Q9BT17 334 aaPredicted RBP8.94□□□□□ -0.98
UBR4-201ENST00000375218 DPEP2Q9H4A9 486 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 EXO5Q9H790 373 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 SLC24A2Q9UI40 661 aa8.94□□□□□ -0.98
UBR4-201ENST00000375218 EFSO43281 561 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 NOS1APO75052 506 aaPredicted RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 AKAP3O75969 853 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 GALTP07902 379 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 GSTA2P09210 222 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 RD3LP0DJH9 198 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 ICAM2P13598 275 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 HOXB8P17481 243 aaPredicted RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 PTPN4P29074 926 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 GRM5P41594 1212 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 CEBPDP49716 269 aaPredicted RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 DMWDQ09019 674 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 SPIDRQ14159 915 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 PDK2Q15119 407 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 UAP1Q16222 522 aaPredicted RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 METAP1DQ6UB28 335 aaPredicted RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 TPGS1Q6ZTW0 290 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 KCTD20Q7Z5Y7 419 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 VSTM4Q8IW00 320 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 RNASE8Q8TDE3 154 aaKnown RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 HAUS1Q96CS2 278 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 PTCD3Q96EY7 689 aaKnown RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 MRPL44Q9H9J2 332 aaKnown RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 RAB6BQ9NRW1 208 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 AHSPQ9NZD4 102 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 BTBD7Q9P203 1132 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 C3orf18Q9UK00 162 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 USP18Q9UMW8 372 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 NCKAP1Q9Y2A7 1128 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 CCNKO75909 580 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 PTPN1P18031 435 aaKnown RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 NCF2P19878 526 aaPredicted RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 RPS5P46782 204 aaKnown RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 FNTBP49356 437 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 PNLIPRP1P54315 467 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 SOX10P56693 466 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 SULT2A1Q06520 285 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 CLCA4Q14CN2 919 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 RIPPLY2Q5TAB7 128 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 FAM228AQ86W67 206 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 OR10H5Q8NGA6 315 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 RLN3Q8WXF3 142 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 CLIC6Q96NY7 704 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 COG4Q9H9E3 785 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 EXOGQ9Y2C4 368 aaKnown RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 TDRKHQ9Y2W6 561 aaKnown RBP8.93□□□□□ -0.98
UBR4-201ENST00000375218 PCDHA3Q9Y5H8 950 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 CORINQ9Y5Q5 1042 aa8.93□□□□□ -0.98
UBR4-201ENST00000375218 A0A0A0MRY4 1105 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms