RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 IL10P22301 178 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 YAP1P46937 504 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 CDH18Q13634 790 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 C6orf136Q5SQH8 315 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 LHX8Q68G74 356 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 Q6ZSR9 355 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 ZBTB46Q86UZ6 589 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 KIAA2013Q8IYS2 634 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 MAGEE2Q8TD90 523 aaPredicted RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 DGCR14Q96DF8 476 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 RNF145Q96MT1 663 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 ALG2Q9H553 416 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 ASB8Q9H765 288 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 C1orf232A0A0U1RR37 186 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 ESRRBO95718 433 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 IDO1P14902 403 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 TTPAP49638 278 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 POLR2JP52435 117 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 TRAP1Q12931 704 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 SELPLGQ14242 412 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 MILR1Q7Z6M3 343 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 NPAS4Q8IUM7 802 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 NKAPQ8N5F7 415 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 OR56A4Q8NGH8 313 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 DDI1Q8WTU0 396 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 GPATCH1Q9BRR8 931 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 SMG9Q9H0W8 520 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 HACD3Q9P035 362 aa16.86■□□□□ 0.29
RXRB-201ENST00000374680 OAS3Q9Y6K5 1087 aaKnown RBP16.86■□□□□ 0.29
RXRB-201ENST00000374680 PATJQ8NI35 1801 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 ILVBLA1L0T0 632 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 TBC1D4O60343 1298 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 SNUPNO95149 360 aaKnown RBP16.85■□□□□ 0.29
RXRB-201ENST00000374680 RPS17P08708 135 aaKnown RBP16.85■□□□□ 0.29
RXRB-201ENST00000374680 PSMA4P25789 261 aaKnown RBP16.85■□□□□ 0.29
RXRB-201ENST00000374680 KPNA1P52294 538 aaPredicted RBP16.85■□□□□ 0.29
RXRB-201ENST00000374680 MAPK10P53779 464 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 OR4D2P58180 307 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 ATP6V0D1P61421 351 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 LAMB3Q13751 1172 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 PTGR1Q14914 329 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 RFTN2Q52LD8 501 aaPredicted RBP16.85■□□□□ 0.29
RXRB-201ENST00000374680 GALNT7Q86SF2 657 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 SFRP1Q8N474 314 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 OR4F6Q8NGB9 312 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 OR10Q1Q8NGQ4 319 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 SEPT8Q92599 483 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 TBCDQ9BTW9 1192 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 VPS51Q9UID3 782 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 POLR3HQ9Y535 204 aaPredicted RBP16.85■□□□□ 0.29
RXRB-201ENST00000374680 CASP8AP2Q9UKL3 1982 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 E2F3O00716 465 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 RSL1D1O76021 490 aaKnown RBP16.85■□□□□ 0.29
RXRB-201ENST00000374680 PRAMEF1O95521 474 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 SLC2A4P14672 509 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 ATP6AP1LQ52LC2 224 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 AP1ARQ63HQ0 302 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 NANOGP8Q6NSW7 305 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 SERPINA9Q86WD7 417 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 EPHX4Q8IUS5 362 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 CHERPQ8IWX8 916 aaKnown RBP16.85■□□□□ 0.29
RXRB-201ENST00000374680 FATE1Q969F0 183 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 ROPN1LQ96C74 230 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 NANOGQ9H9S0 305 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 LATS2Q9NRM7 1088 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 SMOXQ9NWM0 555 aa16.85■□□□□ 0.29
RXRB-201ENST00000374680 DUS2Q9NX74 493 aaKnown RBP16.85■□□□□ 0.29
RXRB-201ENST00000374680 EI24O14681 340 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 SLC25A14O95258 325 aaPredicted RBP16.84■□□□□ 0.29
RXRB-201ENST00000374680 ABRAXAS2Q15018 415 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 RBBP5Q15291 538 aaKnown RBP16.84■□□□□ 0.29
RXRB-201ENST00000374680 USP41Q3LFD5 358 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 C8orf82Q6P1X6 216 aaPredicted RBP16.84■□□□□ 0.29
RXRB-201ENST00000374680 RFLNAQ6ZTI6 216 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 AHI1Q8N157 1196 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 TMEM125Q96AQ2 219 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 ZNF597Q96LX8 424 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 TCF12Q99081 682 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 HOPXQ9BPY8 73 aaPredicted RBP16.84■□□□□ 0.29
RXRB-201ENST00000374680 FEM1AQ9BSK4 669 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 IPPKQ9H8X2 491 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 VCX3AQ9NNX9 186 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 HMX1Q9NP08 348 aaPredicted RBP16.84■□□□□ 0.29
RXRB-201ENST00000374680 THEGQ9P2T0 379 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 ANGPTL3Q9Y5C1 460 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 A0A1W2PP18 115 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 UROSP10746 265 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 FASP25445 335 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 TUFMP49411 452 aaKnown RBP16.84■□□□□ 0.29
RXRB-201ENST00000374680 CYP4F8P98187 520 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 INPP5AQ14642 412 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 AP5B1Q2VPB7 878 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 TMEM214Q6NUQ4 689 aaKnown RBP16.84■□□□□ 0.29
RXRB-201ENST00000374680 ERMP1Q7Z2K6 904 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 TSPAN33Q86UF1 283 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 TTC30BQ8N4P2 665 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 PROKR1Q8TCW9 393 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 ASB2Q96Q27 587 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 OLAHQ9NV23 265 aa16.84■□□□□ 0.29
RXRB-201ENST00000374680 CIDEBQ9UHD4 219 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms