RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TAGLNQ01995 201 aaKnown RBP12.8□□□□□ -0.36
PRPF4-201ENST00000374198 GPR50Q13585 617 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 ANKRD34AQ69YU3 496 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 GLYATQ6IB77 296 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 FAM160B2Q86V87 743 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 RASAL3Q86YV0 1011 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 GIPC2Q8TF65 315 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 FBLIM1Q8WUP2 373 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 OMA1Q96E52 524 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 NUAK2Q9H093 628 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 PORCNQ9H237 461 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 DUSP21Q9H596 190 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 PIF1Q9H611 641 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 ZFP14Q9HCL3 533 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 USE1Q9NZ43 259 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 GIMAP2Q9UG22 337 aa12.8□□□□□ -0.36
PRPF4-201ENST00000374198 PRKD3O94806 890 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 MED26O95402 600 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 TNNC2P02585 160 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 ICAM1P05362 532 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 HOXC6P09630 235 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 PTGS2P35354 604 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 TGFBR2P37173 567 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 CLK1P49759 484 aaKnown RBP12.79□□□□□ -0.36
PRPF4-201ENST00000374198 SLC35A2P78381 396 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 GHRHRQ02643 423 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 STARD3Q14849 445 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 SURF1Q15526 300 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 FXNQ16595 210 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 FAM98BQ52LJ0 330 aaKnown RBP12.79□□□□□ -0.36
PRPF4-201ENST00000374198 FAM205BPQ63HN1 556 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 HS3ST5Q8IZT8 346 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 SLC39A13Q96H72 371 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 ZIC5Q96T25 663 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 RBM4BQ9BQ04 359 aaKnown RBP12.79□□□□□ -0.36
PRPF4-201ENST00000374198 RBM4Q9BWF3 364 aaKnown RBP12.79□□□□□ -0.36
PRPF4-201ENST00000374198 GSTO2Q9H4Y5 243 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 A0A087X1B8 175 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 HMX3A6NHT5 357 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 MEN1O00255 615 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 FADS2O95864 444 aaKnown RBP12.79□□□□□ -0.36
PRPF4-201ENST00000374198 RBP1P09455 135 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 TPH1P17752 444 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 NPY2RP49146 381 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 OR4D2P58180 307 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 SLC6A3Q01959 620 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 TRIP4Q15650 581 aaPredicted RBP12.79□□□□□ -0.36
PRPF4-201ENST00000374198 UGP2Q16851 508 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 PUS10Q3MIT2 529 aaKnown RBP12.79□□□□□ -0.36
PRPF4-201ENST00000374198 BCL7AQ4VC05 210 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 DCAF15Q66K64 600 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 PYROXD2Q8N2H3 581 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 PHF21BQ96EK2 531 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 PHOX2BQ99453 314 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 NXF2Q9GZY0 626 aaKnown RBP12.79□□□□□ -0.36
PRPF4-201ENST00000374198 SDR39U1Q9NRG7 319 aaPredicted RBP12.79□□□□□ -0.36
PRPF4-201ENST00000374198 KLHL8Q9P2G9 620 aaPredicted RBP12.79□□□□□ -0.36
PRPF4-201ENST00000374198 SNX6Q9UNH7 406 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 TPRKBQ9Y3C4 175 aa12.79□□□□□ -0.36
PRPF4-201ENST00000374198 A0A1W2PP18 115 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 PLA2G6O60733 806 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 SLC4A1P02730 911 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 JUNDP17535 347 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 TSPAN8P19075 237 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 FCGRTP55899 365 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 IL5RAQ01344 420 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 CHRNB3Q05901 458 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 IL18R1Q13478 541 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 GRB7Q14451 532 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 RPS6KA2Q15349 733 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 TECRLQ5HYJ1 363 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 LDLRAD1Q5T700 205 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 ZNF517Q6ZMY9 492 aaPredicted RBP12.78□□□□□ -0.36
PRPF4-201ENST00000374198 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
PRPF4-201ENST00000374198 MICU2Q8IYU8 434 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 SNAPC3Q92966 411 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 APOL2Q9BQE5 337 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 PRDM12Q9H4Q4 367 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 TMEM134Q9H6X4 195 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 ACOT13Q9NPJ3 140 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 IGSF5Q9NSI5 407 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 ABI2Q9NYB9 513 aaPredicted RBP12.78□□□□□ -0.36
PRPF4-201ENST00000374198 C3orf18Q9UK00 162 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 DSEQ9UL01 958 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 KCNH4Q9UQ05 1017 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 BTBD3Q9Y2F9 522 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 H3BMM5 538 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 KCNK1O00180 336 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 CTDSP2O14595 271 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 MT-ND2P03891 347 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 PFKMP08237 780 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 NAT2P11245 290 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 FMO3P31513 532 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 ARL4AP40617 200 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 TAS2R39P59534 338 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 INCA1Q0VD86 236 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 CSHL1Q14406 222 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 FAM214AQ32MH5 1076 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 PARP15Q460N3 678 aa12.78□□□□□ -0.36
PRPF4-201ENST00000374198 B3GNT8Q7Z7M8 397 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms