RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 CNOT3O75175 753 aaKnown RBP11.97□□□□□ -0.49
HDAC8-204ENST00000373560 IPO13O94829 963 aaKnown RBP11.97□□□□□ -0.49
HDAC8-204ENST00000373560 UNC5CO95185 931 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 VIPP01282 170 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 KLK3P07288 261 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-204ENST00000373560 PNMA6AP0CW24 399 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-204ENST00000373560 PFKFB1P16118 471 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 CUL4AQ13619 759 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 CEBPEQ15744 281 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 ZNF789Q5FWF6 425 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 ZNF648Q5T619 568 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-204ENST00000373560 FOXD4L5Q5VV16 416 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-204ENST00000373560 B3GNTL1Q67FW5 361 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-204ENST00000373560 ARHGAP36Q6ZRI8 547 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 D2HGDHQ8N465 521 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 CHDHQ8NE62 594 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-204ENST00000373560 FOXD4L4Q8WXT5 416 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-204ENST00000373560 AP2M1Q96CW1 435 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 ZDHHC12Q96GR4 267 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 CELF6Q96J87 481 aaKnown RBP11.97□□□□□ -0.49
HDAC8-204ENST00000373560 GBP5Q96PP8 586 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 LIME1Q9H400 295 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 ARFGAP3Q9NP61 516 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 EPHA6Q9UF33 1036 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 SLC23A2Q9UGH3 650 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 TMEM59LQ9UK28 342 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 PCDHGC4Q9Y5F7 938 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 ATRQ13535 2644 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 AKAP6Q13023 2319 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 CNTRLQ7Z7A1 2325 aa11.97□□□□□ -0.49
HDAC8-204ENST00000373560 HCFC1P51610 2035 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 WASH4PA8MWX3 477 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 CPP00450 1065 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 SLC2A4P14672 509 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 CTPS1P17812 591 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 XRCC1P18887 633 aaPredicted RBP11.96□□□□□ -0.49
HDAC8-204ENST00000373560 USP8P40818 1118 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 ME1P48163 572 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 CSNK1DP48730 415 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 GSDMDP57764 484 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 TUBB4BP68371 445 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 TRAF2Q12933 501 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 TUBB2AQ13885 445 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 PRKD1Q15139 912 aaPredicted RBP11.96□□□□□ -0.49
HDAC8-204ENST00000373560 C3AR1Q16581 482 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 ZNF385CQ66K41 422 aaPredicted RBP11.96□□□□□ -0.49
HDAC8-204ENST00000373560 CYB5D1Q6P9G0 228 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 TRIM48Q8IWZ4 208 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 LRRN4CLQ8ND94 238 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 GPR150Q8NGU9 434 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 ADAMTS18Q8TE60 1221 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 UBXN4Q92575 508 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 CLIP3Q96DZ5 547 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 MAGEB10Q96LZ2 347 aaPredicted RBP11.96□□□□□ -0.49
HDAC8-204ENST00000373560 FER1L6-AS2Q96M78 137 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 TRIM56Q9BRZ2 755 aaKnown RBP11.96□□□□□ -0.49
HDAC8-204ENST00000373560 TUBB2BQ9BVA1 445 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 LRRC19Q9H756 370 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 UPF2Q9HAU5 1272 aaKnown RBP11.96□□□□□ -0.49
HDAC8-204ENST00000373560 KCND1Q9NSA2 647 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 KLC4Q9NSK0 619 aa11.96□□□□□ -0.49
HDAC8-204ENST00000373560 OR5K4A6NMS3 321 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 FADS2P1A8MWK0 482 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 HTRA2O43464 458 aaPredicted RBP11.95□□□□□ -0.5
HDAC8-204ENST00000373560 EPHB2P29323 1055 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 PRCPP42785 496 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 SCNN1BP51168 640 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 SOX8P57073 446 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 PARP15Q460N3 678 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 FAAH2Q6GMR7 532 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 TMEM207Q6UWW9 146 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 CDK15Q96Q40 435 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 WDR24Q96S15 920 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 OCSTAMPQ9BR26 566 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 RIOK2Q9BVS4 552 aaKnown RBP11.95□□□□□ -0.5
HDAC8-204ENST00000373560 TLR10Q9BXR5 811 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 SLC40A1Q9NP59 571 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 METTL5Q9NRN9 209 aaKnown RBP11.95□□□□□ -0.5
HDAC8-204ENST00000373560 VPS18Q9P253 973 aa11.95□□□□□ -0.5
HDAC8-204ENST00000373560 PSMD11O00231 422 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 FANCGO15287 622 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 FOSL1P15407 271 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 YBEYP58557 167 aaPredicted RBP11.94□□□□□ -0.5
HDAC8-204ENST00000373560 POLR2LP62875 67 aaKnown RBP11.94□□□□□ -0.5
HDAC8-204ENST00000373560 ADAM8P78325 824 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 FKBP3Q00688 224 aaKnown RBP11.94□□□□□ -0.5
HDAC8-204ENST00000373560 LRRC66Q68CR7 880 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 MTFR2Q6P444 385 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 CRTC3Q6UUV7 619 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 BIVMQ86UB2 503 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 TMEM200AQ86VY9 491 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 ZDHHC17Q8IUH5 632 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 PHYKPLQ8IUZ5 450 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 LZTR1Q8N653 840 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 OR1L3Q8NH93 324 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 GPT2Q8TD30 523 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 CPT1BQ92523 772 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 RAB33BQ9H082 229 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 GDPD2Q9HCC8 539 aa11.94□□□□□ -0.5
HDAC8-204ENST00000373560 SLC6A20Q9NP91 592 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms