RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ABLIM1O14639 778 aa11.44□□□□□ -0.58
VCL-202ENST00000372755 MSI1O43347 362 aaKnown RBP11.44□□□□□ -0.58
VCL-202ENST00000372755 HCN1O60741 890 aa11.44□□□□□ -0.58
VCL-202ENST00000372755 CYB5AP00167 134 aa11.44□□□□□ -0.58
VCL-202ENST00000372755 PCCBP05166 539 aa11.44□□□□□ -0.58
VCL-202ENST00000372755 SLC35G6P0C7Q6 338 aa11.44□□□□□ -0.58
VCL-202ENST00000372755 PTX3P26022 381 aaPredicted RBP11.44□□□□□ -0.58
VCL-202ENST00000372755 MAPK12P53778 367 aa11.44□□□□□ -0.58
VCL-202ENST00000372755 CNTD1Q8N815 330 aa11.44□□□□□ -0.58
VCL-202ENST00000372755 CCDC54Q8NEL0 328 aa11.44□□□□□ -0.58
VCL-202ENST00000372755 PNPT1Q8TCS8 783 aaKnown RBP11.44□□□□□ -0.58
VCL-202ENST00000372755 TLE6Q9H808 572 aa11.44□□□□□ -0.58
VCL-202ENST00000372755 EVLQ9UI08 416 aaPredicted RBP11.44□□□□□ -0.58
VCL-202ENST00000372755 CLEC4AQ9UMR7 237 aa11.44□□□□□ -0.58
VCL-202ENST00000372755 TRIM3O75382 744 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 ARF4P18085 180 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 VARSP26640 1264 aaKnown RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 NAE1Q13564 534 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 MSANTD2Q6P1R3 559 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 SVOPLQ8N434 492 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 HPS1Q92902 700 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 PPM1MQ96MI6 270 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 PCBD2Q9H0N5 130 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 WDR55Q9H6Y2 383 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 E9PCH4 1651 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 EPHB6O15197 1021 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 RNASEH2AO75792 299 aaKnown RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 CCNB2O95067 398 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 PRR5P85299 388 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 METTL21CQ5VZV1 264 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 IRF2BP2Q7Z5L9 587 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 PGAM4Q8N0Y7 254 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 GPR21Q99679 349 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 HSD17B14Q9BPX1 270 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 SPATA9Q9BWV2 254 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 FAM124BQ9H5Z6 455 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 EURLQ9NYK6 297 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 NOS1APO75052 506 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 ALAS2P22557 587 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 POU5F1Q01860 360 aaKnown RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 CBX3Q13185 183 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 GTF2H2Q13888 395 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 ZMYND11Q15326 602 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 SLC30A6Q6NXT4 461 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 GTF2H2CQ6P1K8 395 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 GET4Q7L5D6 327 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 OTOP3Q7RTS5 596 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 LMLNQ96KR4 655 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 FAM83DQ9H4H8 585 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 LRRC4CQ9HCJ2 640 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 SMPD3Q9NY59 655 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 TBC1D24Q9ULP9 559 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 TLX3O43711 291 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 TSPAN9O75954 239 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 RPIAP49247 311 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 ILF3Q12906 894 aaKnown RBP eCLIP11.43□□□□□ -0.582e-7■□□□□ 8.1
VCL-202ENST00000372755 LCP2Q13094 533 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 SIM2Q14190 667 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 ZFP69Q49AA0 526 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 CLPTM1LQ96KA5 538 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 FAM172BPA6NC97 362 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 UBXN7O94888 489 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 RASGRP1O95267 797 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 PAPSS2O95340 614 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 CYP3A5P20815 502 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 CCR10P46092 362 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 DEFB115Q30KQ5 88 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 ZNF311Q5JNZ3 666 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 IL23RQ5VWK5 629 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 REP15Q6BDI9 236 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 QSOX2Q6ZRP7 698 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 ZNF554Q86TJ5 538 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 RALGPS2Q86X27 583 aaPredicted RBP11.43□□□□□ -0.58
VCL-202ENST00000372755 PPP1R13LQ8WUF5 828 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 MGME1Q9BQP7 344 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 ABCB9Q9NP78 766 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 TIMMDC1Q9NPL8 285 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 CDH22Q9UJ99 828 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 PTPRJQ12913 1337 aa11.43□□□□□ -0.58
VCL-202ENST00000372755 H3BNX3 289 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 MFSD11O43934 449 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 CCNE2O96020 404 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 PGRP06401 933 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 IL12BP29460 328 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 RPP38P78345 283 aaKnown RBP11.42□□□□□ -0.58
VCL-202ENST00000372755 CLCQ05315 142 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 PRKD1Q15139 912 aaPredicted RBP11.42□□□□□ -0.58
VCL-202ENST00000372755 TBC1D25Q3MII6 688 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 ANKS1BQ7Z6G8 1248 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 SAMD14Q8IZD0 417 aaPredicted RBP11.42□□□□□ -0.58
VCL-202ENST00000372755 SLC22A17Q8WUG5 538 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 AZIN2Q96A70 460 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 NXNL1Q96CM4 212 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 HIST1H2AAQ96QV6 131 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 MED28Q9H204 178 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 IFT46Q9NQC8 304 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 SQORQ9Y6N5 450 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 DIP2BQ9P265 1576 aa11.42□□□□□ -0.58
VCL-202ENST00000372755 LRRC72A6NJI9 287 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms