RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 HMBOX1Q6NT76 420 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 FAM151BQ6UXP7 276 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 DCBLD1Q8N8Z6 715 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 TEX37Q96LM6 180 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 EFHD1Q9BUP0 239 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 MRPL17Q9NRX2 175 aaKnown RBP20.33■□□□□ 0.85
VEGFA-204ENST00000372064 TMEM45AQ9NWC5 275 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 SPG21Q9NZD8 308 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 PCDHGB4Q9UN71 923 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 PCDHGB5Q9Y5G0 923 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 PCDHA9Q9Y5H5 950 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 ASPDHA6ND91 283 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 CCL5P13501 91 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 GABRR2P28476 465 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 ERVK-8P63133 956 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 CREB5Q02930 508 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 AHI1Q8N157 1196 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 SPATA16Q9BXB7 569 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 TRIM54Q9BYV2 358 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 SEMA6AQ9H2E6 1030 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 SLC24A3Q9HC58 644 aa20.33■□□□□ 0.85
VEGFA-204ENST00000372064 AQP12BA6NM10 295 aa20.33■□□□□ 0.84
VEGFA-204ENST00000372064 SBSNQ6UWP8 590 aa20.33■□□□□ 0.84
VEGFA-204ENST00000372064 GAREM2Q75VX8 874 aa20.33■□□□□ 0.84
VEGFA-204ENST00000372064 AQP12AQ8IXF9 295 aa20.33■□□□□ 0.84
VEGFA-204ENST00000372064 GOLM1Q8NBJ4 401 aa20.33■□□□□ 0.84
VEGFA-204ENST00000372064 ACOX2Q99424 681 aa20.33■□□□□ 0.84
VEGFA-204ENST00000372064 COQ10BQ9H8M1 238 aa20.33■□□□□ 0.84
VEGFA-204ENST00000372064 RC3H2Q9HBD1 1191 aaKnown RBP20.33■□□□□ 0.84
VEGFA-204ENST00000372064 TBX21Q9UL17 535 aa20.33■□□□□ 0.84
VEGFA-204ENST00000372064 ZNF106Q9H2Y7 1883 aaKnown RBP20.32■□□□□ 0.84
VEGFA-204ENST00000372064 GOLGA8CPA6NN73 597 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 ENO4A6NNW6 628 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 GIPC1O14908 333 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 EEDO75530 441 aaKnown RBP20.32■□□□□ 0.84
VEGFA-204ENST00000372064 OR4F21O95013 312 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 CSPG5O95196 566 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 GRIA3P42263 894 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 MNX1P50219 401 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-204ENST00000372064 ERVPABLB-1P60509 514 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 YBX1P67809 324 aaKnown RBP20.32■□□□□ 0.84
VEGFA-204ENST00000372064 CAPRIN1Q14444 709 aaKnown RBP20.32■□□□□ 0.84
VEGFA-204ENST00000372064 LCN8Q6JVE9 175 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 ADAMTSL2Q86TH1 951 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 DDX53Q86TM3 631 aaKnown RBP20.32■□□□□ 0.84
VEGFA-204ENST00000372064 CNBD2Q96M20 576 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 C2orf49Q9BVC5 232 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-204ENST00000372064 TRIM15Q9C019 465 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 ZNF696Q9H7X3 374 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 CCM2LQ9NUG4 571 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-204ENST00000372064 RIC8BQ9NVN3 520 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 SNX13Q9Y5W8 968 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 HTRA2O43464 458 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-204ENST00000372064 CKMP06732 381 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 KCNK10P57789 538 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 MTX3Q5HYI7 312 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 RETSATQ6NUM9 610 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 PAF1Q8N7H5 531 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 OR52B6Q8NGF0 335 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 BOCQ9BWV1 1114 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 ATP11BQ9Y2G3 1177 aa20.32■□□□□ 0.84
VEGFA-204ENST00000372064 SCN8AQ9UQD0 1980 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 C7orf72A4D263 438 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 ZNF839A8K0R7 811 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 PRAMEF1O95521 474 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 CA8P35219 290 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 CSNK1DP48730 415 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 MYBPC1Q00872 1141 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 CDKN3Q16667 212 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 TPGS1Q6ZTW0 290 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 ITIH5Q86UX2 942 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 SERPINA9Q86WD7 417 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 BBS7Q8IWZ6 715 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 ANKFN1Q8N957 763 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 CANT1Q8WVQ1 401 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 TOX2Q96NM4 488 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 EPB41L1Q9H4G0 881 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 ZFYVE1Q9HBF4 777 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 ZIM2Q9NZV7 527 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 ACTR3BQ9P1U1 418 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 TNPO3Q9Y5L0 923 aaKnown RBP20.31■□□□□ 0.84
VEGFA-204ENST00000372064 SLC22A3O75751 556 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 BMP2P12643 396 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 ZNF7P17097 686 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-204ENST00000372064 ITGB6P18564 788 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 BCL2L1Q07817 233 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 GK3PQ14409 553 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 C18orf21Q32NC0 220 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-204ENST00000372064 LETMD1Q6P1Q0 360 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 HS6ST3Q8IZP7 471 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 TMEM125Q96AQ2 219 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 CDK15Q96Q40 435 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 TNKS2Q9H2K2 1166 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 CFAP97Q9P2B7 532 aa20.31■□□□□ 0.84
VEGFA-204ENST00000372064 C1orf232A0A0U1RR37 186 aa20.3■□□□□ 0.84
VEGFA-204ENST00000372064 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-204ENST00000372064 NRG2O14511 850 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-204ENST00000372064 TNFAIP8O95379 198 aa20.3■□□□□ 0.84
VEGFA-204ENST00000372064 TRBC1P01850 177 aa20.3■□□□□ 0.84
VEGFA-204ENST00000372064 LAG3P18627 525 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms