RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 CCDC106Q9BWC9 280 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 EML4Q9HC35 981 aaKnown RBP17.3■□□□□ 0.36
SSBP3-203ENST00000371319 ARMCX1Q9P291 453 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 KLHL42Q9P2K6 505 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 TMCO1Q9UM00 188 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 STON1Q9Y6Q2 735 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 CKAP5Q14008 2032 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 H0Y858 1186 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 STX16-NPEPL1H3BU86 382 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 STX16O14662 325 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 SUPT7LO94864 414 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 POU3F3P20264 500 aaPredicted RBP17.29■□□□□ 0.36
SSBP3-203ENST00000371319 DGKAP23743 735 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 PSMD8P48556 350 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 ALDH18A1P54886 795 aaKnown RBP17.29■□□□□ 0.36
SSBP3-203ENST00000371319 ELP6Q0PNE2 266 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 TMEM52BQ4KMG9 183 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 KHDC1Q4VXA5 237 aaKnown RBP17.29■□□□□ 0.36
SSBP3-203ENST00000371319 GPSM1Q86YR5 675 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 TREML1Q86YW5 311 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 RAVER1Q8IY67 606 aaKnown RBP17.29■□□□□ 0.36
SSBP3-203ENST00000371319 DDHD1Q8NEL9 900 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 EZH1Q92800 747 aaPredicted RBP17.29■□□□□ 0.36
SSBP3-203ENST00000371319 ERLEC1Q96DZ1 483 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 DTD2Q96FN9 168 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 ZSCAN5AQ9BUG6 496 aa17.29■□□□□ 0.36
SSBP3-203ENST00000371319 TSR3Q9UJK0 312 aaKnown RBP17.29■□□□□ 0.36
SSBP3-203ENST00000371319 C1QTNF3-AMACRE9PGA6 284 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 K7EQS6 105 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 WNT9AO14904 365 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 SGTAO43765 313 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 JUNP05412 331 aaKnown RBP17.28■□□□□ 0.36
SSBP3-203ENST00000371319 RPS17P08708 135 aaKnown RBP17.28■□□□□ 0.36
SSBP3-203ENST00000371319 OR56A5P0C7T3 313 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 ATP1B2P14415 290 aaPredicted RBP17.28■□□□□ 0.36
SSBP3-203ENST00000371319 EEF1DP29692 281 aaKnown RBP17.28■□□□□ 0.36
SSBP3-203ENST00000371319 TNFRSF4P43489 277 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 RGS4P49798 205 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 ZNF284Q2VY69 593 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 SBSNQ6UWP8 590 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 CYHR1Q6ZMK1 362 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 ERN2Q76MJ5 926 aaKnown RBP17.28■□□□□ 0.36
SSBP3-203ENST00000371319 DSG4Q86SJ6 1040 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 SLC7A6OSQ96CW6 309 aaPredicted RBP17.28■□□□□ 0.36
SSBP3-203ENST00000371319 NSL1Q96IY1 281 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 VPS35Q96QK1 796 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 PANX3Q96QZ0 392 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 OR52B2Q96RD2 323 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 P2RY13Q9BPV8 354 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 TUBB6Q9BUF5 446 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 C1QTNF3Q9BXJ4 246 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 HDAC8Q9BY41 377 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 KCTD5Q9NXV2 234 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 NUDT4Q9NZJ9 180 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 MAGEC1O60732 1142 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 MTX2O75431 263 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 TSPAN8P19075 237 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 CCR7P32248 378 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 WASP42768 502 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 MAGEA9P43362 315 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 CDH13P55290 713 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 UBAP2LQ14157 1087 aaKnown RBP17.28■□□□□ 0.36
SSBP3-203ENST00000371319 GBX1Q14549 363 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 CRY1Q16526 586 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 PPP1R3AQ16821 1122 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 AAK1Q2M2I8 961 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 TXNDC11Q6PKC3 985 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 NUDT18Q6ZVK8 323 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 DET1Q7L5Y6 550 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 CYP2U1Q7Z449 544 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 MYO1HQ8N1T3 1032 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 CSGALNACT1Q8TDX6 532 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 ZNF483Q8TF39 744 aaPredicted RBP17.28■□□□□ 0.36
SSBP3-203ENST00000371319 BTN2A2Q8WVV5 523 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 AP2M1Q96CW1 435 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 DCUN1D1Q96GG9 259 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 FAR2Q96K12 515 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 NSUN5Q96P11 429 aaKnown RBP17.28■□□□□ 0.36
SSBP3-203ENST00000371319 NUF2Q9BZD4 464 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 LRMDAQ9H2I8 198 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 WDR55Q9H6Y2 383 aaPredicted RBP17.28■□□□□ 0.36
SSBP3-203ENST00000371319 DYRK4Q9NR20 520 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 LNPEPQ9UIQ6 1025 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 CD207Q9UJ71 328 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 SORCS3Q9UPU3 1222 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 COQ6Q9Y2Z9 468 aa17.28■□□□□ 0.36
SSBP3-203ENST00000371319 CFAP73A6NFT4 308 aa17.27■□□□□ 0.35
SSBP3-203ENST00000371319 NCF1BA6NI72 391 aaPredicted RBP17.27■□□□□ 0.35
SSBP3-203ENST00000371319 NCF1CA8MVU1 366 aaPredicted RBP17.27■□□□□ 0.35
SSBP3-203ENST00000371319 AP2A2O94973 939 aa17.27■□□□□ 0.35
SSBP3-203ENST00000371319 CBSLP0DN79 551 aa17.27■□□□□ 0.35
SSBP3-203ENST00000371319 NCF1P14598 390 aaPredicted RBP17.27■□□□□ 0.35
SSBP3-203ENST00000371319 AOAHP28039 575 aa17.27■□□□□ 0.35
SSBP3-203ENST00000371319 AKT1P31749 480 aa17.27■□□□□ 0.35
SSBP3-203ENST00000371319 CBSP35520 551 aa17.27■□□□□ 0.35
SSBP3-203ENST00000371319 P2RY2P41231 377 aa17.27■□□□□ 0.35
SSBP3-203ENST00000371319 KIR2DL1P43626 348 aaPredicted RBP17.27■□□□□ 0.35
SSBP3-203ENST00000371319 AGTR2P50052 363 aa17.27■□□□□ 0.35
SSBP3-203ENST00000371319 TGFBIQ15582 683 aa17.27■□□□□ 0.35
SSBP3-203ENST00000371319 PDCD2Q16342 344 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms