RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TEX28O15482 410 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF682O95780 498 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 LYNP07948 512 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 LINGO3P0C6S8 592 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC35G4P0C7Q5 338 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ATP6V1B2P21281 511 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 GRIA3P42263 894 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 POLR2JP52435 117 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 OCA2Q04671 838 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 TNK2Q07912 1038 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 GPM6BQ13491 265 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CLEC6AQ6EIG7 209 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 C22orf39Q6P5X5 142 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SCIMPQ6UWF3 145 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 GK5Q6ZS86 529 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CDHR3Q6ZTQ4 885 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 PAGE2Q7Z2X7 111 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 R3HCC1LQ7Z5L2 792 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 TP53INP2Q8IXH6 220 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 EID3Q8N140 333 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC39A11Q8N1S5 342 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 OR9Q1Q8NGQ5 310 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 RHEBL1Q8TAI7 183 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SKA1Q96BD8 255 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 TRMT2BQ96GJ1 504 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC39A13Q96H72 371 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ITCHQ96J02 903 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 RNF145Q96MT1 663 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SEPHS2Q99611 448 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 NPAS2Q99743 824 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 C1orf50Q9BV19 199 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 LRTM1Q9HBL6 345 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ARNT2Q9HBZ2 717 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ADPRHL2Q9NX46 363 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CLCA2Q9UQC9 943 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ERVW-1Q9UQF0 538 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 TTC24A2A3L6 582 aaPredicted RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 NEMP2A6NFY4 417 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 HHLA1C9JL84 531 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 NBNO60934 754 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 NIPSNAP2O75323 286 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 PGLSO95336 258 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 TIMP1P01033 207 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 FYNP06241 537 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CTSAP10619 480 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 PPP2R1BP30154 601 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 POM121L1PQ3SYA9 428 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC9B1Q4ZJI4 515 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ACSBG2Q5FVE4 666 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 FAM182AQ5T1J6 154 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 INTS11Q5TA45 600 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF621Q6ZSS3 439 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ARHGAP12Q8IWW6 846 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CMTM8Q8IZV2 173 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 PQLC1Q8N2U9 271 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 GLB1L3Q8NCI6 653 aaPredicted RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ADCY4Q8NFM4 1077 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 OLIG1Q8TAK6 271 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 DNAJB14Q8TBM8 379 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ARNTL2Q8WYA1 636 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 FATE1Q969F0 183 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 PRICKLE1Q96MT3 831 aaPredicted RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 CYP2S1Q96SQ9 504 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ZSCAN5AQ9BUG6 496 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 TDRD1Q9BXT4 1180 aaKnown RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ZFP14Q9HCL3 533 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 PHPT1Q9NRX4 125 aaPredicted RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 MAGEL2Q9UJ55 1249 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF490Q9ULM2 529 aaPredicted RBP5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 LZTS1Q9Y250 596 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 LRRC42Q9Y546 428 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 WASF2Q9Y6W5 498 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 PDE4DIPQ5VU43 2346 aa5.26□□□□□ -1.57
SMNDC1-202ENST00000369603 SAC3D1A6NKF1 404 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 PIP5K1BO14986 540 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 FFAR2O15552 330 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ECI2O75521 394 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC35E2BP0CK96 405 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 PRPS2P11908 318 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 KELP23276 732 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TPP2P29144 1249 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ETV4P43268 484 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ASMTP46597 345 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 HSPA7P48741 367 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 HNMTP50135 292 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CLCN4P51793 760 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 AP1S2P56377 157 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CSTF3Q12996 717 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 SEMA3BQ13214 749 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TIGD2Q4W5G0 525 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 LIN52Q52LA3 116 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 PITRM1Q5JRX3 1037 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ANXA8L1Q5VT79 327 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 DNAJC14Q6Y2X3 702 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 RTL10Q7L3V2 364 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 GET4Q7L5D6 327 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CYP4Z1Q86W10 505 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 HPS6Q86YV9 775 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ZDHHC13Q8IUH4 622 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms