RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 SLC19A1P41440 591 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 SEMA5AQ13591 1074 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 C16orf72Q14CZ0 275 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 AMZ1Q400G9 498 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 NKAIN2Q5VXU1 208 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 SLC9B2Q86UD5 537 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 FBXO39Q8N4B4 442 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 OR4D9Q8NGE8 314 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 DPYSL5Q9BPU6 564 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 THSD1Q9NS62 852 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 KCNK4Q9NYG8 393 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 ACSL6Q9UKU0 697 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 PCDHGA7Q9Y5G6 932 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 IGLV3-16A0A075B6K0 115 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 SNX2O60749 519 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 TNFSF15O95150 251 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 ETS1P14921 441 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 TPH1P17752 444 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 FDFT1P37268 417 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 HADHAP40939 763 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 EPHA4P54764 986 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 PCBP4P57723 403 aaKnown RBP20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 INSCQ1MX18 579 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 PLA2G4EQ3MJ16 856 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 PRUNE1Q86TP1 453 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 ZNF761Q86XN6 746 aaPredicted RBP20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 TRAPPC5Q8IUR0 188 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 REXO1L1PQ8IX06 675 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 AVL9Q8NBF6 648 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 GDAP1Q8TB36 358 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 SH3KBP1Q96B97 665 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 CCDC97Q96F63 343 aaPredicted RBP20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 DNAJC1Q96KC8 554 aaKnown RBP20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 ZCCHC2Q9C0B9 1178 aaKnown RBP20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 ASB8Q9H765 288 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 NLE1Q9NVX2 485 aaPredicted RBP20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 ZNF148Q9UQR1 794 aa20.19■□□□□ 0.82
SMNDC1-201ENST00000369592 LILRA5A6NI73 299 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 HGSO14964 777 aaPredicted RBP20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 POP7O75817 140 aaKnown RBP20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 THRAP10827 490 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 HGFP14210 728 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 RBMS1P29558 406 aaKnown RBP20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 TRA2AQ13595 282 aaKnown RBP eCLIP20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 SNX1Q13596 522 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 GTF2H3Q13889 308 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 MAP9Q49MG5 647 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 TMEM71Q6P5X7 295 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 TMEM220Q6QAJ8 160 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 WDR74Q6RFH5 385 aaPredicted RBP20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 FAM83HQ6ZRV2 1179 aaPredicted RBP20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 MICALCLQ6ZW33 695 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 SNX20Q7Z614 316 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 LINC00523Q86TU6 105 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 SPACA3Q8IXA5 215 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 NXPE1Q8N323 547 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 ZNF248Q8NDW4 579 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 LRRC45Q96CN5 670 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 ZNF514Q96K75 400 aaPredicted RBP20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 LINC00615Q96LM1 132 aaPredicted RBP20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 DCBLD2Q96PD2 775 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 SLC38A3Q99624 504 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 B3GNT4Q9C0J1 378 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 KCNF1Q9H3M0 494 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 TMEM9Q9P0T7 183 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 DNAJC16Q9Y2G8 782 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 WDR37Q9Y2I8 494 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 LOXL2Q9Y4K0 774 aa20.18■□□□□ 0.82
SMNDC1-201ENST00000369592 CCL22O00626 93 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 NRDCO43847 1150 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 FGGP02679 453 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 IDSP22304 550 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 RPL22P35268 128 aaKnown RBP20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 ETV5P41161 510 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 GRIA1P42261 906 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 TLE3Q04726 772 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 CLCA4Q14CN2 919 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 GPR33Q49SQ1 333 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 ZNF658BQ4V348 819 aaPredicted RBP20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 BCL7AQ4VC05 210 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 METRNLQ641Q3 311 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 AMZ2Q86W34 360 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 TAB3Q8N5C8 712 aaPredicted RBP20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 STYXQ8WUJ0 223 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 CDKN2AIPNLQ96HQ2 116 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 CCDC74BQ96LY2 380 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 OSGEPL1Q9H4B0 414 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 SLC40A1Q9NP59 571 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 CASS4Q9NQ75 786 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 OGFRQ9NZT2 677 aa20.17■□□□□ 0.82
SMNDC1-201ENST00000369592 GOLGA6L3A6NEY3 463 aa20.16■□□□□ 0.82
SMNDC1-201ENST00000369592 OR2AG2A6NM03 316 aa20.16■□□□□ 0.82
SMNDC1-201ENST00000369592 NVLO15381 856 aaKnown RBP20.16■□□□□ 0.82
SMNDC1-201ENST00000369592 RRP8O43159 456 aaKnown RBP20.16■□□□□ 0.82
SMNDC1-201ENST00000369592 IFNB1P01574 187 aa20.16■□□□□ 0.82
SMNDC1-201ENST00000369592 ZSCAN5DPP0CG00 497 aa20.16■□□□□ 0.82
SMNDC1-201ENST00000369592 TMPRSS15P98073 1019 aa20.16■□□□□ 0.82
SMNDC1-201ENST00000369592 BIRC2Q13490 618 aa20.16■□□□□ 0.82
SMNDC1-201ENST00000369592 POU6F1Q14863 301 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms