RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CSGALNACT1Q8TDX6 532 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 HEXDCQ8WVB3 486 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 XYLT2Q9H1B5 865 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 SERHL2Q9H4I8 314 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 SERHLQ9NQF3 203 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 RPS6KA6Q9UK32 745 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 TIMM22Q9Y584 194 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 GOT2P00505 430 aaKnown RBP13.15□□□□□ -0.3
PTPRK-204ENST00000368210 NUP62P37198 522 aaPredicted RBP13.15□□□□□ -0.3
PTPRK-204ENST00000368210 FAM182AQ5T1J6 154 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 ZNF438Q7Z4V0 828 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 GPR156Q8NFN8 814 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 RNASE11Q8TAA1 199 aaKnown RBP13.15□□□□□ -0.3
PTPRK-204ENST00000368210 TWIST2Q8WVJ9 160 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 PANX1Q96RD7 426 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 TOR4AQ9NXH8 423 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 TAS2R1Q9NYW7 299 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 C3orf18Q9UK00 162 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 POLR3HQ9Y535 204 aaPredicted RBP13.15□□□□□ -0.3
PTPRK-204ENST00000368210 MYH13Q9UKX3 1938 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 A0A0U1RQF3 1178 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 GRM6O15303 877 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 HCRTO43612 131 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 DYRK3O43781 588 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 ZNF460Q14592 562 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 HERC3Q15034 1050 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 CLEC6AQ6EIG7 209 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 SPATA19Q7Z5L4 167 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 IFNL1Q8IU54 200 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 CENPSQ8N2Z9 138 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 CNTD1Q8N815 330 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 CAPNS2Q96L46 248 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 OSBPL2Q9H1P3 480 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 KCTD5Q9NXV2 234 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 CNTN6Q9UQ52 1028 aa13.15□□□□□ -0.3
PTPRK-204ENST00000368210 DBTP11182 482 aaKnown RBP13.15□□□□□ -0.31
PTPRK-204ENST00000368210 HCAR3P49019 387 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 SEPHS1P49903 392 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 CACNG1Q06432 222 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 LSM12Q3MHD2 195 aaKnown RBP13.15□□□□□ -0.31
PTPRK-204ENST00000368210 HMBOX1Q6NT76 420 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 PLET1Q6UQ28 207 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 CYP20A1Q6UW02 462 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 CPSF7Q8N684 471 aaKnown RBP13.15□□□□□ -0.31
PTPRK-204ENST00000368210 FBXO22Q8NEZ5 403 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 HDAC2Q92769 488 aaKnown RBP13.15□□□□□ -0.31
PTPRK-204ENST00000368210 TIFAQ96CG3 184 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 CADM1Q9BY67 442 aaKnown RBP13.15□□□□□ -0.31
PTPRK-204ENST00000368210 FAIMQ9NVQ4 179 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.15□□□□□ -0.31
PTPRK-204ENST00000368210 ENTPD4Q9Y227 616 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 TLR6Q9Y2C9 796 aa13.15□□□□□ -0.31
PTPRK-204ENST00000368210 SH3PXD2BA1X283 911 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 CXorf49A8MYA2 514 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 RFXANKO14593 260 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 TOP3BO95985 862 aaKnown RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 SLC18A1P54219 525 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 GPX6P59796 221 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 LSM3P62310 102 aaKnown RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 LCP2Q13094 533 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 BICRALQ6AI39 1079 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 ZCCHC8Q6NZY4 707 aaKnown RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 TLDC1Q6P9B6 456 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 PRSS55Q6UWB4 352 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 RAB2BQ8WUD1 216 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 FAR1Q8WVX9 515 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 CLP1Q92989 425 aaKnown RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 EMID1Q96A84 441 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 PLCL2Q9UPR0 1127 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 NUP98P52948 1817 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 CENPBD1B2RD01 187 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 TFECO14948 347 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 TLL1O43897 1013 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 FOSL1P15407 271 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 CXCR3P49682 368 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 THOP1P52888 689 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 AP5B1Q2VPB7 878 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 INO80DQ53TQ3 878 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 ACSBG2Q5FVE4 666 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 C11orf88Q6PI97 169 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 TBX10O75333 385 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 KLHL18O94889 574 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 LRATO95237 230 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 PRAMEF1O95521 474 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 SNAI1O95863 264 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 TBX18O95935 607 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 YES1P07947 543 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 SLC1A2P43004 574 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 CD97P48960 835 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 IDH3AP50213 366 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 CLCQ05315 142 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 MSS51Q4VC12 460 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 GDF6Q6KF10 455 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 OSTM1Q86WC4 334 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 PGAM4Q8N0Y7 254 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 SUSD3Q96L08 255 aa13.14□□□□□ -0.31
PTPRK-204ENST00000368210 ZNF317Q96PQ6 595 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-204ENST00000368210 ZNF717Q9BY31 904 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms