RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 C7P10643 843 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 IMPDH2P12268 514 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 ITGALP20701 1170 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 ATP6V1C1P21283 382 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 RPA3P35244 121 aaPredicted RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 CSRP3P50461 194 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 ZXDAP98168 799 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 MTAPQ13126 283 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 LRRC32Q14392 662 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 USP10Q14694 798 aaKnown RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 SETMARQ53H47 684 aaPredicted RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TRIM74Q86UV6 250 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 PLD6Q8N2A8 252 aaKnown RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 NXPE1Q8N323 547 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 PGBD3Q8N328 593 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 SPATA6LQ8N4H0 392 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 ZNF75CPQ92670 426 aaPredicted RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 AP2M1Q96CW1 435 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 NUS1Q96E22 293 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TSC22D3Q99576 134 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 C19orf43Q9BQ61 176 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TPSD1Q9BZJ3 242 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 UNKQ9C0B0 810 aaKnown RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 YIPF3Q9GZM5 350 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 DCLRE1BQ9H816 532 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 FBRSQ9HAH7 460 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 MBNL1Q9NR56 388 aaKnown RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 CRLS1Q9UJA2 301 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 ANKRD12Q6UB98 2062 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TTC28Q96AY4 2481 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TBC1D3DA0A087WVF3 549 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TBC1D3IA0A087WXS9 549 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TBC1D3EA0A087X179 549 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TBC1D3KA0A087X1G2 549 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TBC1D3FA6NER0 549 aaPredicted RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TBC1D3LB9A6J9 549 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 PSMD11O00231 422 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 NIPSNAP2O75323 286 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TBC1D3HP0C7X1 549 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TROVE2P10155 538 aaKnown RBP eCLIP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 ACADMP11310 421 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 NFKBIAP25963 317 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 CNTFP26441 200 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TYK2P29597 1187 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 MAGEA12P43365 314 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TTPAP49638 278 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 SUOXP51687 545 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 DGKEP52429 567 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 DCDC1P59894 354 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 MRPS35P82673 323 aaKnown RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 CREB5Q02930 508 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 LGSNQ5TDP6 509 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 HECTD2Q5U5R9 776 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TBC1D3GQ6DHY5 549 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TBC1D3CQ6IPX1 549 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TMEM207Q6UWW9 146 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TIFABQ6ZNK6 161 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 GALNT7Q86SF2 657 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 RBM12BQ8IXT5 1001 aaKnown RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 TBC1D3Q8IZP1 549 aaPredicted RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 SYNPOQ8N3V7 929 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 FAM160A2Q8N612 972 aaPredicted RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 BANPQ8N9N5 519 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 RLN3Q8WXF3 142 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 ALKBH8Q96BT7 664 aaKnown RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 SLC30A3Q99726 388 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 P2RY12Q9H244 342 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 SLCO1B3Q9NPD5 702 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 ZFP69BQ9UJL9 534 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 GRID1Q9ULK0 1009 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 CNOT6Q9ULM6 557 aaKnown RBP12.09□□□□□ -0.47
CAPN9-203ENST00000366666 LAMA1P25391 3075 aa12.09□□□□□ -0.47
CAPN9-203ENST00000366666 A0A1W2PQU0 124 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 RAD51BO15315 384 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 TSPAN6O43657 245 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 C2P06681 752 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 SLC35E2BP0CK96 405 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 ACADSP16219 412 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 SLC18A2Q05940 514 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 TSNAXIP1Q2TAA8 658 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 WSCD2Q2TBF2 565 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 GPRC6AQ5T6X5 926 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 NAPRTQ6XQN6 538 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 DET1Q7L5Y6 550 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 OTOAQ7RTW8 1153 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 LKAAEAR1Q8TD35 194 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 ISL2Q96A47 359 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 CLDN23Q96B33 292 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 MTBPQ96DY7 904 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 MYOCQ99972 504 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 POLMQ9NP87 494 aaPredicted RBP12.08□□□□□ -0.48
CAPN9-203ENST00000366666 FZD3Q9NPG1 666 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 INTS10Q9NVR2 710 aaKnown RBP12.08□□□□□ -0.48
CAPN9-203ENST00000366666 SLC17A7Q9P2U7 560 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 SIT1Q9Y3P8 196 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 ZDBF2Q9HCK1 2354 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 A0A096LPK6 155 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 TM9SF1O15321 606 aa12.08□□□□□ -0.48
CAPN9-203ENST00000366666 RNGTTO60942 597 aaKnown RBP12.08□□□□□ -0.48
CAPN9-203ENST00000366666 TM7SF2O76062 418 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms