RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 PKP4Q99569 1192 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 HGH1Q9BTY7 390 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 TEX12Q9BXU0 123 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 SEMA6AQ9H2E6 1030 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 RETREG1Q9H6L5 497 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 ANKEF1Q9NU02 776 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNF580Q9UK33 172 aa4.14□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZCWPW2A0A1B0GU75 182 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 A0A1B0GUV1 79 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 LNP1A1A4G5 178 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 OR5K3A6NET4 321 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 C5orf60A6NFR6 353 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 TMEM178BH3BS89 294 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 ADAM20O43506 726 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 WDR1O75083 606 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 AVILO75366 819 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 USP8P40818 1118 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 ERVFC1-1P60608 527 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 CXCL9Q07325 125 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 RAB6CQ53S08 254 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 BMP2KLQ5H9B9 411 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 FAM171BQ6P995 826 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 GALNT5Q7Z7M9 940 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 DSG4Q86SJ6 1040 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 SLC9B2Q86UD5 537 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 MCEMP1Q8IX19 187 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 POC1AQ8NBT0 407 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 PHF21AQ96BD5 680 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 FAM84BQ96KN1 310 aaPredicted RBP4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 LMLNQ96KR4 655 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 CDRT15Q96T59 188 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 KIFC3Q9BVG8 833 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 RAB6CQ9H0N0 254 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 MBNL1Q9NR56 388 aaKnown RBP4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 KLHL1Q9NR64 748 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 GIMAP4Q9NUV9 329 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 TAS2R14Q9NYV8 317 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 MRPL15Q9P015 296 aaKnown RBP4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 RCC2Q9P258 522 aaKnown RBP4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 POU2F3Q9UKI9 436 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 PCDHAC2Q9Y5I4 1007 aa4.13□□□□□ -1.75
RNU6-560P-201ENST00000364007 DENND3A2RUS2 1198 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 OR2M5A3KFT3 312 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 ASPDHA6ND91 283 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 SH2B2O14492 632 aaPredicted RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 EIF3DO15371 548 aaKnown RBP eCLIP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 SLC16A5O15375 505 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 BCL10O95999 233 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 FAM106CPP0CH98 169 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 TGFB3P10600 412 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 NNMTP40261 264 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 ARCN1P48444 511 aaKnown RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 STAT2P52630 851 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 PLIN5Q00G26 463 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 ILF3Q12906 894 aaKnown RBP eCLIP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 GRAPQ13588 217 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 KRT33BQ14525 404 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 NTRK2Q16620 822 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 FAM98BQ52LJ0 330 aaKnown RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZDHHC20Q5W0Z9 365 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNF771Q7L3S4 317 aaPredicted RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 LDB1Q86U70 411 aaPredicted RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 GBGT1Q8N5D6 347 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 KBTBD3Q8NAB2 608 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 KCNH5Q8NCM2 988 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 RBM15BQ8NDT2 890 aaKnown RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 TBC1D16Q8TBP0 767 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 SECTM1Q8WVN6 248 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 PRPF31Q8WWY3 499 aaKnown RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 CCDC34Q96HJ3 373 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 DACH2Q96NX9 599 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 CTAGE1Q96RT6 745 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 ABHD1Q96SE0 405 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 POLR3CQ9BUI4 534 aaPredicted RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 OSGEPL1Q9H4B0 414 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 EVA1AQ9H8M9 152 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 LARSQ9P2J5 1176 aaKnown RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 CHORDC1Q9UHD1 332 aaPredicted RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 HACL1Q9UJ83 578 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 DLGAP4Q9Y2H0 992 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 RABGAP1Q9Y3P9 1069 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 LRP12Q9Y561 859 aa4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 MAGED1Q9Y5V3 778 aaPredicted RBP4.12□□□□□ -1.75
RNU6-560P-201ENST00000364007 CTAGE9A4FU28 777 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 FIBPO43427 364 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 ADRB2P07550 413 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 CTAGE8P0CG41 777 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 NR2F1P10589 423 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 IL15P40933 162 aaPredicted RBP4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 CTSCP53634 463 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 ALS2CLQ60I27 953 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 ZNF704Q6ZNC4 412 aaPredicted RBP4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 INTS8Q75QN2 995 aaKnown RBP4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 CTAGE4Q8IX94 777 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 NAGSQ8N159 534 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 C1orf52Q8N6N3 182 aaKnown RBP4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 CCDC89Q8N998 374 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 APPL2Q8NEU8 664 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 TMEM255BQ8WV15 326 aa4.11□□□□□ -1.75
RNU6-560P-201ENST00000364007 CD101Q93033 1021 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms