RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 GHRHRQ02643 423 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 PTSQ03393 145 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 DPY19L1Q2PZI1 675 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 FAM220AQ7Z4H9 259 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 COMMD2Q86X83 199 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
LDB3-202ENST00000361373 NPY6RQ99463 290 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 SEMA6AQ9H2E6 1030 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 CCNB1IP1Q9NPC3 277 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 CLDND1Q9NY35 253 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 TCEA3O75764 348 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 TBX18O95935 607 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 NOVP48745 357 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 DGUOKQ16854 277 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 TMC8Q8IU68 726 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 SFRP1Q8N474 314 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 DCAF4L2Q8NA75 395 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 IGSF21Q96ID5 467 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 ATG10Q9H0Y0 220 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 GKN1Q9NS71 199 aa13.34□□□□□ -0.27
LDB3-202ENST00000361373 POLR3BQ9NW08 1133 aaPredicted RBP13.34□□□□□ -0.27
LDB3-202ENST00000361373 ENPP3O14638 875 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 KERAO60938 352 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 DNAJB1P25685 340 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 GDI1P31150 447 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 RPL4P36578 427 aaKnown RBP13.33□□□□□ -0.27
LDB3-202ENST00000361373 ZNF132P52740 706 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 ATXN1P54253 815 aaKnown RBP13.33□□□□□ -0.27
LDB3-202ENST00000361373 TAS2R39P59534 338 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 C2orf80Q0P641 193 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 SERINC3Q13530 473 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 C11orf88Q6PI97 169 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 ABRAXAS1Q6UWZ7 409 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 CCDC103Q8IW40 242 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 FLCNQ8NFG4 579 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 TSTD1Q8NFU3 115 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 NUS1Q96E22 293 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 S100A13Q99584 98 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 MCMBPQ9BTE3 642 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 DPEP2Q9H4A9 486 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 BCAS3Q9H6U6 928 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 CCSER2Q9H7U1 834 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 PAPOLBQ9NRJ5 636 aaKnown RBP13.33□□□□□ -0.27
LDB3-202ENST00000361373 ELOVL2Q9NXB9 296 aa13.33□□□□□ -0.27
LDB3-202ENST00000361373 RUVBL1Q9Y265 456 aaKnown RBP13.33□□□□□ -0.27
LDB3-202ENST00000361373 hCG_2014768A0A024R1R8 64 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 IRGMA1A4Y4 181 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 SLC31A1O15431 190 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 OR6B1O95007 311 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 MAPK12P53778 367 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 FASTKD3Q14CZ7 662 aaKnown RBP13.33□□□□□ -0.28
LDB3-202ENST00000361373 OSTM1Q86WC4 334 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 IRF7Q92985 503 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 CXorf56Q9H5V9 222 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 EXO5Q9H790 373 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 WDR26Q9H7D7 661 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 GRHL1Q9NZI5 618 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 SIX4Q9UIU6 781 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 PPEF2O14830 753 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 OR10H3O60404 316 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 RB1P06400 928 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 AP1S2P56377 157 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 SLC1A5Q15758 541 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 TXNDC8Q6A555 127 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 ARHGAP36Q6ZRI8 547 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 PRR23CQ6ZRP0 262 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 CPNE9Q8IYJ1 553 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 PCYT2Q99447 389 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 LPIN3Q9BQK8 851 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 OSBPL11Q9BXB4 747 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 HS3ST4Q9Y661 456 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 ZMPSTE24O75844 475 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 FAM155BO75949 473 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 DLGAP3O95886 979 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 HLA-DQA2P01906 255 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 GSSP48637 474 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 HNMTP50135 292 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 LARS2Q15031 903 aaKnown RBP13.33□□□□□ -0.28
LDB3-202ENST00000361373 DGKKQ5KSL6 1271 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 EOGTQ5NDL2 527 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 SH3PXD2AQ5TCZ1 1133 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 IL23RQ5VWK5 629 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 LDB1Q86U70 411 aaPredicted RBP13.33□□□□□ -0.28
LDB3-202ENST00000361373 ALYREFQ86V81 257 aaKnown RBP13.33□□□□□ -0.28
LDB3-202ENST00000361373 SMOQ99835 787 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 FAM192AQ9GZU8 254 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 CD84Q9UIB8 345 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 IKZF3Q9UKT9 509 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 GABRQQ9UN88 632 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 ENO4A6NNW6 628 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 PRR5-ARHGAP8B1AHC4 643 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 SLC22A2O15244 555 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 MFN2O95140 757 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 IFNGP01579 166 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 ARHGAP8P85298 464 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 UBXN2BQ14CS0 331 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 ARMC3Q5W041 872 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 ZNF783Q6ZMS7 281 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 PEX5LQ8IYB4 626 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms