RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 MICALCLQ6ZW33 695 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 AMZ2Q86W34 360 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CCDC25Q86WR0 208 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CCNJLQ8IV13 435 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ARL10Q8N8L6 244 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 NOA1Q8NC60 698 aaKnown RBP18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 LRRC39Q96DD0 335 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 PWWP2AQ96N64 755 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 EBNA1BP2Q99848 306 aaKnown RBP18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 TIMM29Q9BSF4 260 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ZC3H7BQ9UGR2 993 aaKnown RBP18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 APOBEC2Q9Y235 224 aaKnown RBP18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ASCC3Q8N3C0 2202 aaKnown RBP18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CABIN1Q9Y6J0 2220 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ZNF106Q9H2Y7 1883 aaKnown RBP18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 AGAP14A8MT82 685 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 GOLGA8KD6RF30 607 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 GOLGA8TH3BQL2 631 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 QSOX1O00391 747 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 GIPC1O14908 333 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CBFA2T3O75081 653 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 POP7O75817 140 aaKnown RBP18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CKMT2P17540 419 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 IDSP22304 550 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ELK3P41970 407 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 PPM1FP49593 454 aaPredicted RBP18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CTSCP53634 463 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ZNF449Q6P9G9 518 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ANKMY2Q8IV38 441 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 TRIM56Q9BRZ2 755 aaKnown RBP18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 BOCQ9BWV1 1114 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 TSSK1BQ9BXA7 367 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 STN1Q9H668 368 aaKnown RBP18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 PPANQ9NQ55 473 aaKnown RBP18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 FAM114A2Q9NRY5 505 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CEP250Q9BV73 2442 aa18.88■□□□□ 0.61
HLA-DRB1-201ENST00000360004 UBA6A0AVT1 1052 aaPredicted RBP18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ESYT3A0FGR9 886 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 KCNJ13O60928 360 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 LRP4O75096 1905 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 OR56A5P0C7T3 313 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 MYF5P13349 255 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 DNAJC3Q13217 504 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 HLTFQ14527 1009 aaKnown RBP eCLIP18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 SEPT7Q16181 437 aaKnown RBP18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 PROX2Q3B8N5 592 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 MSS51Q4VC12 460 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 SPANXN3Q5MJ09 141 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 RNF187Q5TA31 235 aaPredicted RBP18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 NEPROQ6NW34 567 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 LDB1Q86U70 411 aaPredicted RBP18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 NRROSQ86YC3 692 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ZBED8Q8IZ13 594 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 BEND7Q8N7W2 519 aaPredicted RBP18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 FAM181AQ8N9Y4 354 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 KYQ8NBH2 561 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 BAHD1Q8TBE0 780 aaPredicted RBP18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CALML6Q8TD86 181 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 NAT14Q8WUY8 206 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 SGSM3Q96HU1 749 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 EPB41L5Q9HCM4 733 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 SAYSD1Q9NPB0 183 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 SPATS2LQ9NUQ6 558 aaKnown RBP18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 PADI4Q9UM07 663 aa18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 PCYT1BQ9Y5K3 369 aaPredicted RBP18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 DNMT3AQ9Y6K1 912 aaPredicted RBP18.87■□□□□ 0.61
HLA-DRB1-201ENST00000360004 TRBV23OR9-2A0A075B6M9 112 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 AP2A2O94973 939 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 FTH1P02794 183 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 GIMD1P0DJR0 217 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 HALP42357 657 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 B4GALNT1Q00973 533 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CRYMQ14894 314 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 BCL7AQ4VC05 210 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ZNF470Q6ECI4 717 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 PTRHD1Q6GMV3 140 aaKnown RBP18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 EFL1Q7Z2Z2 1120 aaKnown RBP18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 TMEM135Q86UB9 458 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 KCNMB4Q86W47 210 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ZNF547Q8IVP9 402 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 TRIM48Q8IWZ4 208 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 PALM2Q8IXS6 379 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 SLC35F3Q8IY50 421 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CLDN19Q8N6F1 224 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 FBXO36Q8NEA4 188 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 MAPK15Q8TD08 544 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 PYROXD1Q8WU10 500 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 IFT81Q8WYA0 676 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 NAT6Q93015 286 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ART4Q93070 314 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 FCRL3Q96P31 734 aaPredicted RBP18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 FAM167BQ9BTA0 163 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 SYNDIG1Q9H7V2 258 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 GRHL1Q9NZI5 618 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 IL1RAPL1Q9NZN1 696 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 MARCH4Q9P2E8 410 aaPredicted RBP18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 MTRF1LQ9UGC7 380 aaKnown RBP18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 VPS9D1Q9Y2B5 631 aa18.86■□□□□ 0.61
HLA-DRB1-201ENST00000360004 KLHL33A6NCF5 533 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms