RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CLK4Q9HAZ1 481 aaKnown RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 ZFYVE1Q9HBF4 777 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 STK39Q9UEW8 545 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 SLC25A13Q9UJS0 675 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 ANKRD6Q9Y2G4 727 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 PKP3Q9Y446 797 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 ASB1Q9Y576 335 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 SCN8AQ9UQD0 1980 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 SDK1Q7Z5N4 2213 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 A0A087X1B8 175 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 DYTNA2CJ06 578 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 UBFD1O14562 309 aaKnown RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 ZNF195O14628 629 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 MAP3K7O43318 606 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 HTRA2O43464 458 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 TULP3O75386 442 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 DCTN3O75935 186 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 UNC5CO95185 931 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 TRIM16O95361 564 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 HNRNPA1P09651 372 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 ADH5P11766 374 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 CD1DP15813 335 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 ZNF37AP17032 561 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 SERPINA4P29622 427 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 WASP42768 502 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 SOX9P48436 509 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 RAB15P59190 212 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 AP1S1P61966 158 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 SNRPD1P62314 119 aaKnown RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 PTSQ03393 145 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 UBE3AQ05086 875 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 TUBB3Q13509 450 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 CDKN3Q16667 212 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 TYSND1Q2T9J0 566 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 CARD16Q5EG05 197 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 LIPMQ5VYY2 423 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 PIWIL4Q7Z3Z4 852 aaKnown RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 KRT77Q7Z794 578 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 OR6Y1Q8NGX8 325 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 FUBP1Q96AE4 644 aaKnown RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 SLC7A6OSQ96CW6 309 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 MRGPRX3Q96LB0 322 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 KCNA7Q96RP8 456 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 MRPL57Q9BQC6 102 aaKnown RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 ASB8Q9H765 288 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 B4GALT6Q9UBX8 382 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 GIMAP2Q9UG22 337 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 SARDHQ9UL12 918 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 ERVW-1Q9UQF0 538 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 HS3ST2Q9Y278 367 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 NOSIPQ9Y314 301 aaKnown RBP5.04□□□□□ -1.6
ATXN3-202ENST00000359366 RWDD3Q9Y3V2 267 aa5.04□□□□□ -1.6
ATXN3-202ENST00000359366 MYO10Q9HD67 2058 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 FRYLO94915 3013 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 LOC100653049A0A140TA62 436 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ATP6AP2A0A1C7CYW4 349 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 HEPACAM2A8MVW5 462 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SUPT3HB4E1H0 165 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 E5RI56 91 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 C3orf80F5H4A9 247 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 BTN3A1O00481 513 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SUPT3HO75486 399 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ATP6AP2O75787 350 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 KRT34O76011 436 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SUPT7LO94864 414 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 WISP3O95389 354 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 TGDSO95455 350 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ANP32DO95626 131 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 RB1P06400 928 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 FSHRP23945 695 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 HMGCLP35914 325 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 DGKGP49619 791 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 PFKPQ01813 784 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GRIN2CQ14957 1233 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 DUSP6Q16828 381 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 FAM45BPQ6NSW5 357 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 TMEM53Q6P2H8 277 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ELMSAN1Q6PJG2 1045 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 LURAP1LQ8IV03 231 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CELF5Q8N6W0 485 aaKnown RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 PTGR2Q8N8N7 351 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GPR150Q8NGU9 434 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 FAM45AQ8TCE6 357 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 LINGO1Q96FE5 620 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ASB16Q96NS5 453 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ACOX2Q99424 681 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 MIPEPQ99797 713 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 WRAP53Q9BUR4 548 aaKnown RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SUV39H2Q9H5I1 410 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 BRD9Q9H8M2 597 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SLC28A3Q9HAS3 691 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 DCAF16Q9NXF7 216 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ZDHHC7Q9NXF8 308 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 KCNK4Q9NYG8 393 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 COQ6Q9Y2Z9 468 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 DMDP11532 3685 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GLYATL1P3A0A0U1RQE8 302 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CAPN8A6NHC0 703 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms