RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 TFAP2CQ92754 450 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 ZNF599Q96NL3 588 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 ILKAPQ9H0C8 392 aaPredicted RBP18.43■□□□□ 0.54
SNX11-201ENST00000359238 RHOJQ9H4E5 214 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 ARMC7Q9H6L4 198 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 DUS2Q9NX74 493 aaKnown RBP18.43■□□□□ 0.54
SNX11-201ENST00000359238 LHX3Q9UBR4 397 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 FBXO5Q9UKT4 447 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 HDAC3O15379 428 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 LATS1O95835 1130 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 SERPINF2P08697 491 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 CD70P32970 193 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 GLRBP48167 497 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 RPS3AP61247 264 aaKnown RBP18.43■□□□□ 0.54
SNX11-201ENST00000359238 TRIM25Q14258 630 aaKnown RBP18.43■□□□□ 0.54
SNX11-201ENST00000359238 MAP7D1Q3KQU3 841 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 XKR5Q6UX68 686 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 FAM217AQ8IXS0 508 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 CMTM8Q8IZV2 173 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 CENPLQ8N0S6 344 aaPredicted RBP18.43■□□□□ 0.54
SNX11-201ENST00000359238 TMEM151AQ8N4L1 468 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 C12orf76Q8N812 135 aaPredicted RBP18.43■□□□□ 0.54
SNX11-201ENST00000359238 C2CD4AQ8NCU7 369 aaPredicted RBP18.43■□□□□ 0.54
SNX11-201ENST00000359238 CCDC97Q96F63 343 aaPredicted RBP18.43■□□□□ 0.54
SNX11-201ENST00000359238 OLFM1Q99784 485 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 NPLQ9BXD5 320 aaPredicted RBP18.43■□□□□ 0.54
SNX11-201ENST00000359238 TM6SF2Q9BZW4 377 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 NKX2-4Q9H2Z4 354 aa18.43■□□□□ 0.54
SNX11-201ENST00000359238 INTS6Q9UL03 887 aaKnown RBP18.43■□□□□ 0.54
SNX11-201ENST00000359238 TMX2-CTNND1H3BSU7 103 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 TK2O00142 265 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 EPHA5P54756 1037 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 CSE1LP55060 971 aaKnown RBP18.42■□□□□ 0.54
SNX11-201ENST00000359238 TAS2R39P59534 338 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 TRAF2Q12933 501 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 ATP1A4Q13733 1029 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 PTK2BQ14289 1009 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 USP10Q14694 798 aaKnown RBP18.42■□□□□ 0.54
SNX11-201ENST00000359238 MTX3Q5HYI7 312 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 PPP4R4Q6NUP7 873 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 HTR3DQ70Z44 454 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 HJURPQ8NCD3 748 aaPredicted RBP18.42■□□□□ 0.54
SNX11-201ENST00000359238 KCTD4Q8WVF5 259 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 FEM1CQ96JP0 617 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 ZSWIM3Q96MP5 696 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 TDRD1Q9BXT4 1180 aaKnown RBP18.42■□□□□ 0.54
SNX11-201ENST00000359238 ZBTB26Q9HCK0 441 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 GID8Q9NWU2 228 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 B3GNT3Q9Y2A9 372 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 MYO9BQ13459 2157 aa18.42■□□□□ 0.54
SNX11-201ENST00000359238 FAM95CA0A1B0GW59 222 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 G3V2L1 256 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 TCN1P20061 433 aaPredicted RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 CDH18Q13634 790 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 CBX2Q14781 532 aaPredicted RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 CPNE9Q8IYJ1 553 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 OR6P1Q8NGX9 317 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 PTCD2Q8WV60 388 aaKnown RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 TRUB1Q8WWH5 349 aaKnown RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNX11-201ENST00000359238 SNX13Q9Y5W8 968 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 A0A1W2PPW3 197 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 TYW5A2RUC4 315 aaKnown RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 NEMP1O14524 444 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 GPR39O43194 453 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 TRIM13O60858 407 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 XYLBO75191 536 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 SLC7A1P30825 629 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 CTSOP43234 321 aaPredicted RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 EIF2B2P49770 351 aaKnown RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 BMXP51813 675 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 LMAN2Q12907 356 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 RGS21Q2M5E4 152 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 FAM219BQ5XKK7 198 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 SEL1L3Q68CR1 1132 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 ASTLQ6HA08 431 aaPredicted RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 TTC33Q6PID6 262 aaPredicted RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 ANKFN1Q8N957 763 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 FAM156AQ8NDB6 213 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 ZNF707Q96C28 371 aaPredicted RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 RPL10LQ96L21 214 aaKnown RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 PPP1R2P1Q96PQ5 205 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 CIB1Q99828 191 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 SCUBE2Q9NQ36 999 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 GIN1Q9NXP7 522 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 UTP6Q9NYH9 597 aaKnown RBP18.41■□□□□ 0.54
SNX11-201ENST00000359238 RAP2CQ9Y3L5 183 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 SLC30A1Q9Y6M5 507 aa18.41■□□□□ 0.54
SNX11-201ENST00000359238 EPOPA6NHQ4 379 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 TRIM24O15164 1050 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 AKAP10O43572 662 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 TIMM44O43615 452 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 NRIP1P48552 1158 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 CDKN1CP49918 316 aaPredicted RBP18.4■□□□□ 0.54
SNX11-201ENST00000359238 AARS2Q5JTZ9 985 aaKnown RBP18.4■□□□□ 0.54
SNX11-201ENST00000359238 EGFLAMQ63HQ2 1017 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 PPP2R2DQ66LE6 453 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 ANKRD26P1Q6NSI1 321 aa18.4■□□□□ 0.54
SNX11-201ENST00000359238 ZBTB49Q6ZSB9 765 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms