RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 HGH1Q9BTY7 390 aa14.72□□□□□ -0.05
GABPB1-202ENST00000359031 CPEB1Q9BZB8 566 aaKnown RBP14.72□□□□□ -0.05
GABPB1-202ENST00000359031 TUBB1Q9H4B7 451 aa14.72□□□□□ -0.05
GABPB1-202ENST00000359031 SUCOQ9UBS9 1254 aaKnown RBP14.72□□□□□ -0.05
GABPB1-202ENST00000359031 RAPGEFL1Q9UHV5 662 aa14.72□□□□□ -0.05
GABPB1-202ENST00000359031 PCDHGA7Q9Y5G6 932 aa14.72□□□□□ -0.05
GABPB1-202ENST00000359031 TNPO3Q9Y5L0 923 aaKnown RBP14.72□□□□□ -0.05
GABPB1-202ENST00000359031 PRUNE2Q8WUY3 3088 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 NCF1BA6NI72 391 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 IQCF5A8MTL0 148 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 NCF1CA8MVU1 366 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 H3BNX3 289 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 E2F3O00716 465 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 CASQ2O14958 399 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 RAD51BO15315 384 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 NRP2O60462 931 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 BCAS2O75934 225 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 MATN4O95460 622 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 PRR35P0CG20 571 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 NCF1P14598 390 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 IDO1P14902 403 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 PTPN2P17706 415 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 XRCC1P18887 633 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 HOXA9P31269 272 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 CTNNB1P35222 781 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 CTSOP43234 321 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 STK19P49842 368 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 AGTR2P50052 363 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 ERVFC1P60507 584 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 PCBP2Q15366 365 aaKnown RBP eCLIP14.71□□□□□ -0.055e-39■■■■■ 107
GABPB1-202ENST00000359031 XKR7Q5GH72 579 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 ZDHHC20Q5W0Z9 365 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 IRGCQ6NXR0 463 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 GPRIN3Q6ZVF9 776 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 ZSWIM9Q86XI8 627 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 KBTBD2Q8IY47 623 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 MYO1HQ8N1T3 1032 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 NXPE1Q8N323 547 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 CHCHD4Q8N4Q1 142 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 MRPL43Q8N983 215 aaKnown RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 PDPRQ8NCN5 879 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 ROPN1LQ96C74 230 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 TUBGCP3Q96CW5 907 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 ZNF641Q96N77 438 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 MCCC1Q96RQ3 725 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 CIPCQ9C0C6 399 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 SUV39H2Q9H5I1 410 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 FBRSL1Q9HCM7 1045 aaKnown RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 HCFC1R1Q9NWW0 138 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 C6orf203Q9P0P8 240 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 EIF2B4Q9UI10 523 aaKnown RBP14.71□□□□□ -0.05
GABPB1-202ENST00000359031 PSMD13Q9UNM6 376 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 CCL26Q9Y258 94 aa14.71□□□□□ -0.05
GABPB1-202ENST00000359031 NPIPB15A6NHN6 443 aaPredicted RBP14.7□□□□□ -0.06
GABPB1-202ENST00000359031 AGAP14A8MT82 685 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 PABPC1P11940 636 aaKnown RBP14.7□□□□□ -0.06
GABPB1-202ENST00000359031 IGFBP4P22692 258 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 DGKAP23743 735 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 PBX2P40425 430 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 BLMHQ13867 455 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 TEAD2Q15562 447 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 CHRNA6Q15825 494 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 CCDC85BQ15834 202 aaPredicted RBP14.7□□□□□ -0.06
GABPB1-202ENST00000359031 CARD16Q5EG05 197 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 C8orf82Q6P1X6 216 aaPredicted RBP14.7□□□□□ -0.06
GABPB1-202ENST00000359031 SBSNQ6UWP8 590 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 IZUMO2Q6UXV1 221 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 PCYOX1LQ8NBM8 494 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 HIPK4Q8NE63 616 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 VOPP1Q96AW1 172 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 ASB9Q96DX5 294 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 SCRN2Q96FV2 425 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 RPL10LQ96L21 214 aaKnown RBP14.7□□□□□ -0.06
GABPB1-202ENST00000359031 PLEKHG4BQ96PX9 1271 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 ECSITQ9BQ95 431 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 BOCQ9BWV1 1114 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 PBX4Q9BYU1 374 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 SPAG4Q9NPE6 437 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 SDR39U1Q9NRG7 319 aaPredicted RBP14.7□□□□□ -0.06
GABPB1-202ENST00000359031 KLHL42Q9P2K6 505 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 TBC1D14Q9P2M4 693 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 BTRCQ9Y297 605 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 OARD1Q9Y530 152 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 PTGDR2Q9Y5Y4 395 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 VGLL3A8MV65 326 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 HIDE1A8MVS5 230 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 MOSPD3O75425 235 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 POP4O95707 220 aaKnown RBP14.7□□□□□ -0.06
GABPB1-202ENST00000359031 HGFP14210 728 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 TCF3P15923 654 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 BMPR1AP36894 532 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 CCNHP51946 323 aaPredicted RBP14.7□□□□□ -0.06
GABPB1-202ENST00000359031 GRIK2Q13002 908 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 GRB7Q14451 532 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 TTLL9Q3SXZ7 439 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 COQ5Q5HYK3 327 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 PRMT9Q6P2P2 845 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 ELMSAN1Q6PJG2 1045 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 PAOXQ6QHF9 649 aa14.7□□□□□ -0.06
GABPB1-202ENST00000359031 CRTC1Q6UUV9 634 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms