RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 DDX6P26196 483 aaKnown RBP eCLIP12.52□□□□□ -0.41
GGPS1-202ENST00000358966 ERFP50548 548 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 DCTN2Q13561 401 aaKnown RBP12.52□□□□□ -0.41
GGPS1-202ENST00000358966 TSNQ15631 228 aaKnown RBP12.52□□□□□ -0.41
GGPS1-202ENST00000358966 CHRNA6Q15825 494 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 TMEM198Q66K66 360 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 ELMSAN1Q6PJG2 1045 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 LRRC74BQ6ZQY2 392 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 SERPINA9Q86WD7 417 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 KBTBD2Q8IY47 623 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 CPNE9Q8IYJ1 553 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 ZNF398Q8TD17 642 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 PEX13Q92968 403 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 TSPAN17Q96FV3 270 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 MIPEPQ99797 713 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 NDEL1Q9GZM8 345 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 SUV39H2Q9H5I1 410 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 MAGEE1Q9HCI5 957 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 TXLNGQ9NUQ3 528 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 GTSE1Q9NYZ3 720 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 SLC30A1Q9Y6M5 507 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 A0A0C4DFX4 3053 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 LAMA1P25391 3075 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 A0A1B0GTL3 188 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 CAPN8A6NHC0 703 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 TULP3O75386 442 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 LEFTY1O75610 366 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 GRM2Q14416 872 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 PFKFB4Q16877 469 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 DCBLD1Q8N8Z6 715 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 GABPB2Q8TAK5 448 aaPredicted RBP12.52□□□□□ -0.41
GGPS1-202ENST00000358966 FNDC8Q8TC99 324 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 EEF1AKMT1Q8WVE0 214 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 MRGPRX3Q96LB0 322 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 TBC1D10AQ9BXI6 508 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 WWP1Q9H0M0 922 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 CDH19Q9H159 772 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 ERVW-1Q9UQF0 538 aa12.52□□□□□ -0.41
GGPS1-202ENST00000358966 LMNAP02545 664 aaKnown RBP12.51□□□□□ -0.41
GGPS1-202ENST00000358966 ADH5P11766 374 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 POLR2EP19388 210 aaKnown RBP12.51□□□□□ -0.41
GGPS1-202ENST00000358966 NCF2P19878 526 aaPredicted RBP12.51□□□□□ -0.41
GGPS1-202ENST00000358966 DUSP6Q16828 381 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 PDCD4Q53EL6 469 aaKnown RBP12.51□□□□□ -0.41
GGPS1-202ENST00000358966 CARD16Q5EG05 197 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 ARSIQ5FYB1 569 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 CLEC6AQ6EIG7 209 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 PHTF2Q8N3S3 785 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 SNX31Q8N9S9 440 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 PPFIBP2Q8ND30 876 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 CCT7Q99832 543 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 B4GALT6Q9UBX8 382 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 TMA7Q9Y2S6 64 aaKnown RBP12.51□□□□□ -0.41
GGPS1-202ENST00000358966 KIF26AQ9ULI4 1882 aaPredicted RBP12.51□□□□□ -0.41
GGPS1-202ENST00000358966 A0A1W2PQ67 120 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 FBP2O00757 339 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 UBFD1O14562 309 aaKnown RBP12.51□□□□□ -0.41
GGPS1-202ENST00000358966 IPO13O94829 963 aaKnown RBP12.51□□□□□ -0.41
GGPS1-202ENST00000358966 DGKGP49619 791 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 PFKPQ01813 784 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 PTSQ03393 145 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 NFATC2Q13469 925 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 FXNQ16595 210 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 TANGO2Q6ICL3 276 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 SATL1Q86VE3 508 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 CELF5Q8N6W0 485 aaKnown RBP12.51□□□□□ -0.41
GGPS1-202ENST00000358966 CD200R1Q8TD46 325 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 SCAMP4Q969E2 229 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 ASB16Q96NS5 453 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 ZNF184Q99676 751 aaPredicted RBP12.51□□□□□ -0.41
GGPS1-202ENST00000358966 BRD9Q9H8M2 597 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 TAS2R13Q9NYV9 303 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 PTTG2Q9NZH5 202 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 TBC1D14Q9P2M4 693 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 CARD8Q9Y2G2 431 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 ASB1Q9Y576 335 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 PTGDR2Q9Y5Y4 395 aa12.51□□□□□ -0.41
GGPS1-202ENST00000358966 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 HEPACAM2A8MVW5 462 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 E5RI56 91 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 BTN3A1O00481 513 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 ZNF197O14709 1029 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 SUPT7LO94864 414 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 FGF19O95750 216 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 APOA4P06727 396 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 MTHFD2P13995 350 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 PKMP14618 531 aaKnown RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 ATP5F1P24539 256 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 TMED10P49755 219 aaKnown RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 AGTR2P50052 363 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 CCT8P50990 548 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 LRP8Q14114 963 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 ACAP2Q15057 778 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 DET1Q7L5Y6 550 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 GALNT7Q86SF2 657 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 ST13P4Q8IZP2 240 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 PTGR2Q8N8N7 351 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 SCAIQ8N9R8 606 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 FRS2Q8WU20 508 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 PHF12Q96QT6 1004 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms