RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 TXNDC16Q9P2K2 825 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 KLQ9UEF7 1012 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 ANKRD6Q9Y2G4 727 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 MED16Q9Y2X0 877 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 PLEKHM1Q9Y4G2 1056 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 WDR87Q6ZQQ6 2873 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 CFAP99D6REC4 459 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 EPN2O95208 641 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 RALBP11234 206 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 RPS3P23396 243 aaKnown RBP eCLIP25.02■■□□□ 1.6
SSBP3-202ENST00000357475 CSE1LP55060 971 aaKnown RBP25.02■■□□□ 1.6
SSBP3-202ENST00000357475 SRP54P61011 504 aaKnown RBP25.02■■□□□ 1.6
SSBP3-202ENST00000357475 TIAL1Q01085 375 aaKnown RBP eCLIP25.02■■□□□ 1.63e-6■■■■□ 20.6
SSBP3-202ENST00000357475 NAPRTQ6XQN6 538 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 TRAPPC5Q8IUR0 188 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 GPATCH11Q8N954 259 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 SUMF1Q8NBK3 374 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 HEXDCQ8WVB3 486 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 ATOH1Q92858 354 aaPredicted RBP25.02■■□□□ 1.6
SSBP3-202ENST00000357475 SCARF2Q96GP6 870 aaPredicted RBP25.02■■□□□ 1.6
SSBP3-202ENST00000357475 AARSD1Q9BTE6 412 aaKnown RBP25.02■■□□□ 1.6
SSBP3-202ENST00000357475 ZCCHC2Q9C0B9 1178 aaKnown RBP25.02■■□□□ 1.6
SSBP3-202ENST00000357475 ZNHIT2Q9UHR6 403 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 SNX11Q9Y5W9 270 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 PCDH15Q96QU1 1955 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 INHBAP08476 426 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 PKMP14618 531 aaKnown RBP25.02■■□□□ 1.6
SSBP3-202ENST00000357475 GNPDA1P46926 289 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 LIMK2P53671 638 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 ADARP55265 1226 aaKnown RBP25.02■■□□□ 1.6
SSBP3-202ENST00000357475 CDKN2DP55273 166 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 OVGP1Q12889 678 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 GTF2H3Q13889 308 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 PTK2BQ14289 1009 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 KIF19Q2TAC6 998 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 GRTP1Q5TC63 336 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 C11orf96Q7Z7L8 435 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 OLFM1Q99784 485 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 CAB39LQ9H9S4 337 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 CARS2Q9HA77 564 aaKnown RBP25.02■■□□□ 1.6
SSBP3-202ENST00000357475 SLC23A2Q9UGH3 650 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 GNPTGQ9UJJ9 305 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 VPS9D1Q9Y2B5 631 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 ST14Q9Y5Y6 855 aa25.02■■□□□ 1.6
SSBP3-202ENST00000357475 FOXO6A8MYZ6 492 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 PFDN6O15212 129 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 GRID2O43424 1007 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 ESR1P03372 595 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 KELP23276 732 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 PBLDP30039 288 aaPredicted RBP25.01■■□□□ 1.59
SSBP3-202ENST00000357475 PRLHRP49683 370 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 C21orf59P57076 290 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 ZNF844Q08AG5 666 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 PYCR3Q53H96 274 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 PTRHD1Q6GMV3 140 aaKnown RBP25.01■■□□□ 1.59
SSBP3-202ENST00000357475 HID1Q8IV36 788 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 SLC30A3Q99726 388 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 CCDC77Q9BR77 488 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 ZNF446Q9NWS9 450 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 GULP1Q9UBP9 304 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 FAM8A1Q9UBU6 413 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 SUSD2Q9UGT4 822 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 TBK1Q9UHD2 729 aa25.01■■□□□ 1.59
SSBP3-202ENST00000357475 ZFC3H1O60293 1989 aaKnown RBP25.01■■□□□ 1.59
SSBP3-202ENST00000357475 FAM95CA0A1B0GW59 222 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 PRR5-ARHGAP8B1AHC4 643 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 CFIP05156 583 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 IVLP07476 585 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 ITGA2BP08514 1039 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 MPLP40238 635 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 IFFO1Q0D2I5 559 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 TEAD4Q15561 434 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 BCL7AQ4VC05 210 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 MROH9Q5TGP6 573 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 HECTD2Q5U5R9 776 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 ADGRD1Q6QNK2 874 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 XKR5Q6UX68 686 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 PIM3Q86V86 326 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 PARGQ86W56 976 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 DCP2Q8IU60 420 aaKnown RBP25■■□□□ 1.59
SSBP3-202ENST00000357475 CYP4X1Q8N118 509 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 LOXL4Q96JB6 756 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 ELMO2Q96JJ3 720 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 EURLQ9NYK6 297 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 FETUBQ9UGM5 382 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 SLC24A2Q9UI40 661 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 RAB23Q9ULC3 237 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 PCDHB1Q9Y5F3 818 aa25■■□□□ 1.59
SSBP3-202ENST00000357475 RALGAPA1Q6GYQ0 2036 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 TLDC2A0PJX2 215 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 TNFRSF10CO14798 259 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 AP2A2O94973 939 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 TRIM16O95361 564 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 SAT1P21673 171 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 GMPRP36959 345 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 CTSKP43235 329 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 DUOXA1Q1HG43 343 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 LRRTM4Q86VH4 590 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 GALNT13Q8IUC8 556 aa24.99■■□□□ 1.59
SSBP3-202ENST00000357475 DCLK2Q8N568 766 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms