RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 GPRIN3Q6ZVF9 776 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CNPY4Q8N129 248 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 OR2L5Q8NG80 312 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PSMA8Q8TAA3 256 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 UCKL1Q9NWZ5 548 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PTPRUQ92729 1446 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PDE2AO00408 941 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TBX1O43435 398 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CAMK1DQ8IU85 385 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 DAGLBQ8NCG7 672 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TRMT10AQ8TBZ6 339 aaKnown RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 IPPKQ9H8X2 491 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PCDH18Q9HCL0 1135 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 C11orf16Q9NQ32 467 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 A0A088AWK7 358 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CCDC163A0A0D9SF12 145 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 SLC28A1O00337 649 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PLD2O14939 933 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 LIASO43766 372 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 KLK1P06870 262 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 JUPP14923 745 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ZNF10P21506 573 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 SLC7A1P30825 629 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 HOXC12P31275 282 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 GMPRP36959 345 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 IRF9Q00978 393 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ILF3Q12906 894 aaKnown RBP eCLIP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 DEFB110Q30KQ9 67 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 GLYATQ6IB77 296 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 RTL4Q6ZR62 310 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 XYLT1Q86Y38 959 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TRPV3Q8NET8 790 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 NKX2-3Q8TAU0 364 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TMEM203Q969S6 136 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 RIOK2Q9BVS4 552 aaKnown RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 BTBD1Q9H0C5 482 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 FAM83DQ9H4H8 585 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 L1RE1Q9UN81 338 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PNPLA6Q8IY17 1366 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TCRBV21S2A2A0A5A6 115 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CASKO14936 926 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 BCL10O95999 233 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CHIT1Q13231 466 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 IL23RQ5VWK5 629 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ANKRD22Q5VYY1 191 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 SLC4A11Q8NBS3 891 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PLEKHG4BQ96PX9 1271 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 FTHL17Q9BXU8 183 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TXNRD2Q9NNW7 524 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ALKQ9UM73 1620 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ZSCAN5BA6NJL1 495 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 HNRNPRO43390 633 aaKnown RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 SERPINE1P05121 402 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ASGR2P07307 311 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CDH5P33151 784 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TXNL4AP83876 142 aaKnown RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 FPGSQ05932 587 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ZNF544Q6NX49 715 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TSHZ1Q6ZSZ6 1077 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 MON1AQ86VX9 555 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ZCCHC7Q8N3Z6 543 aaKnown RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 RIBC1Q8N443 379 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 OR6K6Q8NGW6 343 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 WDR60Q8WVS4 1066 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TGM7Q96PF1 710 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PHF12Q96QT6 1004 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CIB1Q99828 191 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 BTBD10Q9BSF8 475 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 GPR174Q9BXC1 333 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 UGT2B28Q9BY64 529 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TMEM134Q9H6X4 195 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TBC1D17Q9HA65 648 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 KDM5CP41229 1560 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CENPXA8MT69 81 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 SPATA31C2B4DYI2 1134 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CDC7O00311 574 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ME2P23368 584 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 C1QTNF8P60827 252 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 OR4N5Q8IXE1 308 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PRR18Q8N4B5 295 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 EEF1AKMT1Q8WVE0 214 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 FAM118AQ9NWS6 357 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 WHRNQ9P202 907 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TBC1D24Q9ULP9 559 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 SEC14L5O43304 696 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 SPAG6O75602 509 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 GJB5O95377 273 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ITGA2BP08514 1039 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ANXA4P09525 319 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CPN2P22792 545 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 TTKP33981 857 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 SNAPC1Q16533 368 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 SLC35F1Q5T1Q4 408 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 OGFOD2Q6N063 350 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PAOXQ6QHF9 649 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ABHD15Q6UXT9 468 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ZZZ3Q8IYH5 903 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 ZNF775Q96BV0 537 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 OXNAD1Q96HP4 312 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PPP1R2P1Q96PQ5 205 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms