RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 SKIV2LQ15477 1246 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 LY6G5CQ5SRR4 150 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 KDELC2Q7Z4H8 507 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CEP97Q8IW35 865 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CCDC117Q8IWD4 279 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 AQP12AQ8IXF9 295 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CELF5Q8N6W0 485 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 ASIC4Q96FT7 647 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CNDP2Q96KP4 475 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 TEKT5Q96M29 485 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 MYADMQ96S97 322 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 GPATCH1Q9BRR8 931 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 BBS2Q9BXC9 721 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 S1PR5Q9H228 398 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 POMKQ9H5K3 350 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 C8orf4Q9NR00 106 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 RBM22Q9NW64 420 aaKnown RBP eCLIP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 VCANP13611 3396 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 BPTFQ12830 3046 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 MRASO14807 208 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 UBDO15205 165 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 NRP2O60462 931 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 SNAP91O60641 907 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 GJB3O75712 270 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 LATS1O95835 1130 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 PORP16435 677 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 CSKP41240 450 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 ARCN1P48444 511 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 KPNA2P52292 529 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 CBX3Q13185 183 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 SERINC3Q13530 473 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 ZNF829Q3KNS6 432 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 SLC36A3Q495N2 470 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 MPPE1Q53F39 396 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 TANGO2Q6ICL3 276 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 NAPEPLDQ6IQ20 393 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 DHFR2Q86XF0 187 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 CAMK1DQ8IU85 385 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 RNF135Q8IUD6 432 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 ADGRG2Q8IZP9 1017 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 APCDD1Q8J025 514 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 TERB1Q8NA31 727 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 MYLIPQ8WY64 445 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 SMARCD2Q92925 531 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 BORCS5Q969J3 196 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 ROPN1LQ96C74 230 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 GAS2L1Q99501 681 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 NPLQ9BXD5 320 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 RPF2Q9H7B2 306 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 NT5MQ9NPB1 228 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 ABCD2Q9UBJ2 740 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 KIF26AQ9ULI4 1882 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 HEPACAM2A8MVW5 462 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 MATN3O15232 486 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 SRP72O76094 671 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 CYBBP04839 570 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 HLA-DQB2P05538 268 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 STMN1P16949 149 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 HOXB8P17481 243 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 TPH1P17752 444 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 CD70P32970 193 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 PGGT1BP53609 377 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 TNK2Q07912 1038 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 C16orf72Q14CZ0 275 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 AGKQ53H12 422 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 PCID2Q5JVF3 399 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 PKN3Q6P5Z2 889 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 SPRED1Q7Z699 444 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 LINC00523Q86TU6 105 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 EPHX4Q8IUS5 362 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 FAM217AQ8IXS0 508 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 CCNYL1Q8N7R7 359 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 SPATA22Q8NHS9 363 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 SNRNP27Q8WVK2 155 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 CANT1Q8WVQ1 401 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 SLC45A3Q96JT2 553 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 EXOC2Q96KP1 924 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 SMOXQ9NWM0 555 aa12.56□□□□□ -0.4
RTFDC1-202ENST00000357348 FAM95CA0A1B0GW59 222 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 DYTNA2CJ06 578 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 GOLGA8TH3BQL2 631 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 GFRA2O00451 464 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 TIPRLO75663 272 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 ATE1O95260 518 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 MT-CYBP00156 380 aaPredicted RBP12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 TYRP14679 529 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 ZNF12P17014 697 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 ATP6V1B2P21281 511 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 OXCT1P55809 520 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 MPP1Q00013 466 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 GRSF1Q12849 480 aaKnown RBP eCLIP12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 MERTKQ12866 999 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 ATP6AP1Q15904 470 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 PARP15Q460N3 678 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 TECRLQ5HYJ1 363 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 CHST9Q7L1S5 443 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 CPXM2Q8N436 756 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 AFAP1L2Q8N4X5 818 aa12.55□□□□□ -0.4
RTFDC1-202ENST00000357348 TBC1D15Q8TC07 691 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms