RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 TRIM10Q9UDY6 481 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 SLC23A2Q9UGH3 650 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 IL17BQ9UHF5 180 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 PKP3Q9Y446 797 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 HYOU1Q9Y4L1 999 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 PCDHB3Q9Y5E6 796 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 SETXQ7Z333 2677 aaKnown RBP10.49□□□□□ -0.73
CAPN3-204ENST00000356316 LOC285095A0A1B0GVY8 99 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 AURKAO14965 403 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 NKX2-8O15522 239 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 SUV39H1O43463 412 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 PSTPIP1O43586 416 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 MTX2O75431 263 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 ANKRD34CP0C6C1 535 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 PRKAR1AP10644 381 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 NFKB1P19838 968 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 TCN2P20062 427 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 CDKN2BP42772 138 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 SEPHS1P49903 392 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 DRG2P55039 364 aaKnown RBP10.48□□□□□ -0.73
CAPN3-204ENST00000356316 POLE2P56282 527 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 WNT3AP56704 352 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 ITGA9Q13797 1035 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 SEPT6Q14141 434 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 LLGL1Q15334 1064 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 SPA17Q15506 151 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 SIRPB2Q5JXA9 342 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 LDLRAP1Q5SW96 308 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 CCDC181Q5TID7 509 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 AGAP9Q5VTM2 703 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 KLHL35Q6PF15 583 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 C6orf15Q6UXA7 325 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-204ENST00000356316 WASH2PQ6VEQ5 465 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 SPOCD1Q6ZMY3 1216 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 AMZ2Q86W34 360 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 RASGRP3Q8IV61 690 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 UNC5BQ8IZJ1 945 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 BLOC1S5Q8TDH9 187 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 OR6C1Q96RD1 312 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 FSD1LQ9BXM9 530 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 ULBP3Q9BZM4 244 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 APMAPQ9HDC9 416 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 WASH6PQ9NQA3 447 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 SCHIP1Q9P0W5 487 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-204ENST00000356316 TRHDEQ9UKU6 1024 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 TMEM184BQ9Y519 407 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-204ENST00000356316 SPO11Q9Y5K1 396 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 ALG6Q9Y672 507 aa10.48□□□□□ -0.73
CAPN3-204ENST00000356316 ASH1LQ9NR48 2969 aaKnown RBP10.47□□□□□ -0.73
CAPN3-204ENST00000356316 GLYATL1P3A0A0U1RQE8 302 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 LOC101059948A0A1B0GTJ6 334 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 OR52A4PA6NMU1 304 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 HACD1B0YJ81 288 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 C9P02748 559 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 SPAM1P38567 509 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 ARL4DP49703 201 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 GFERP55789 205 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 NFKB2Q00653 900 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 MPP3Q13368 585 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 MAP7Q14244 749 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 CACHD1Q5VU97 1274 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 IRGCQ6NXR0 463 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 C16orf46Q6P387 395 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 FAM92BQ6ZTR7 304 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 TIPARPQ7Z3E1 657 aaKnown RBP10.47□□□□□ -0.73
CAPN3-204ENST00000356316 GLT6D1Q7Z4J2 308 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 PTRH1Q86Y79 214 aaKnown RBP10.47□□□□□ -0.73
CAPN3-204ENST00000356316 ZNF547Q8IVP9 402 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 KATNAL2Q8IYT4 538 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 BEND7Q8N7W2 519 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-204ENST00000356316 RNF214Q8ND24 703 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 IPMKQ8NFU5 416 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 DTX3LQ8TDB6 740 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 APOBEC4Q8WW27 367 aaKnown RBP10.47□□□□□ -0.73
CAPN3-204ENST00000356316 STAMBPL1Q96FJ0 436 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 RBM41Q96IZ5 413 aaKnown RBP10.47□□□□□ -0.73
CAPN3-204ENST00000356316 ELMO2Q96JJ3 720 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 FCRL5Q96RD9 977 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 SPRY4Q9C004 299 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 TRIM4Q9C037 500 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 SLC40A1Q9NP59 571 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 IL26Q9NPH9 171 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 RSPH14Q9UHP6 348 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 TUBD1Q9UJT1 453 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 DNMT3AQ9Y6K1 912 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-204ENST00000356316 SLC30A1Q9Y6M5 507 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 MN1Q10571 1320 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-204ENST00000356316 AHCTF1Q8WYP5 2266 aa10.47□□□□□ -0.73
CAPN3-204ENST00000356316 C2orf81A6NN90 581 aa10.46□□□□□ -0.73
CAPN3-204ENST00000356316 F5H423 210 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-204ENST00000356316 H7C0C1 242 aa10.46□□□□□ -0.73
CAPN3-204ENST00000356316 STX7O15400 261 aaKnown RBP10.46□□□□□ -0.73
CAPN3-204ENST00000356316 UGT1A9O60656 530 aa10.46□□□□□ -0.73
CAPN3-204ENST00000356316 KATNA1O75449 491 aa10.46□□□□□ -0.73
CAPN3-204ENST00000356316 POP7O75817 140 aaKnown RBP10.46□□□□□ -0.73
CAPN3-204ENST00000356316 ANXA9O76027 345 aa10.46□□□□□ -0.73
CAPN3-204ENST00000356316 STK10O94804 968 aaKnown RBP10.46□□□□□ -0.73
CAPN3-204ENST00000356316 NDUFA10O95299 355 aa10.46□□□□□ -0.73
CAPN3-204ENST00000356316 MT-ND3P03897 115 aa10.46□□□□□ -0.73
CAPN3-204ENST00000356316 BRAFP15056 766 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms