RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 CXCR3P49682 368 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 ACADVLP49748 655 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 ARF3P61204 181 aaPredicted RBP7.81□□□□□ -1.16
VANGL1-202ENST00000355485 ARF1P84077 181 aaKnown RBP7.81□□□□□ -1.16
VANGL1-202ENST00000355485 HKDC1Q2TB90 917 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 KIAA0319Q5VV43 1072 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 OTOP1Q7RTM1 612 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 ANKFN1Q8N957 763 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 FNDC8Q8TC99 324 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 CANT1Q8WVQ1 401 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 EFHD2Q96C19 240 aaPredicted RBP7.81□□□□□ -1.16
VANGL1-202ENST00000355485 SPATA13Q96N96 652 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 OR52B2Q96RD2 323 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 TMEM109Q9BVC6 243 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 SLC39A8Q9C0K1 460 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 TKTL2Q9H0I9 626 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 UNC93B1Q9H1C4 597 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 OPTCQ9UBM4 332 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 ZCCHC11Q5TAX3 1644 aaKnown RBP7.81□□□□□ -1.16
VANGL1-202ENST00000355485 HACD1B0YJ81 288 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 M0R129 80 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 MEIS2O14770 477 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 TSHRP16473 764 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 KLHL26Q53HC5 615 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.81□□□□□ -1.16
VANGL1-202ENST00000355485 ASCC1Q8N9N2 400 aaKnown RBP7.81□□□□□ -1.16
VANGL1-202ENST00000355485 DNAAF1Q8NEP3 725 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 HM13Q8TCT9 377 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 AP3S1Q92572 193 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 PRICKLE1Q96MT3 831 aaPredicted RBP7.81□□□□□ -1.16
VANGL1-202ENST00000355485 GAL3ST1Q99999 423 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 CATSPERZQ9NTU4 200 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 SLC27A6Q9Y2P4 619 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 PCDHB3Q9Y5E6 796 aa7.81□□□□□ -1.16
VANGL1-202ENST00000355485 A0A1W2PQ67 120 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 E9PAM4 449 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 CSTBP04080 98 aaKnown RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 HSD17B2P37059 387 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 PER3P56645 1201 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 CSTF1Q05048 431 aaKnown RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 FAM46CQ5VWP2 391 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 NEPROQ6NW34 567 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 ENDOVQ8N8Q3 282 aaKnown RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 FAM98AQ8NCA5 519 aaKnown RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 GAB3Q8WWW8 586 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 TRIM43Q96BQ3 446 aaPredicted RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 CCDC120Q96HB5 630 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 SHDQ96IW2 340 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 TBC1D17Q9HA65 648 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 TREM1Q9NP99 234 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 PAQR5Q9NXK6 330 aaPredicted RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 TESMINQ9Y4I5 508 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 ALKQ9UM73 1620 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 SLC12A8A0AV02 714 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 A6NHS1 94 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 GAD2Q05329 585 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 TUBA3CQ13748 450 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 TOR1AIP1Q5JTV8 583 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 UBE2UQ5VVX9 321 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 CXorf40AQ8TE69 158 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 SLC22A4Q9H015 551 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 ZDHHC4Q9NPG8 344 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 TMPRSS4Q9NRS4 437 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 TMPRSS11EQ9UL52 423 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 OAZ3Q9UMX2 235 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 GOLGA4Q13439 2230 aaKnown RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 HYKKA2RU49 373 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 FUOMA2VDF0 154 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 SLC35F4A4IF30 521 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 CXorf49A8MYA2 514 aaPredicted RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 MSCO60682 206 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 FGF19O95750 216 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 ERBB2P04626 1255 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 FABP3P05413 133 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 C2P06681 752 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 PORP16435 677 aaPredicted RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 GRM3Q14832 879 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 SNAPC1Q16533 368 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 GPAT3Q53EU6 434 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 ZNF280DQ6N043 979 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 SNX29P2Q8IUI4 249 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 LZTR1Q8N653 840 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 SLC15A4Q8N697 577 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 CERKQ8TCT0 537 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 SMG7Q92540 1137 aaKnown RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 TMEM203Q969S6 136 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 KREMEN1Q96MU8 473 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 OPA3Q9H6K4 179 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 MRM3Q9HC36 420 aaKnown RBP7.8□□□□□ -1.16
VANGL1-202ENST00000355485 ANKDD1BA6NHY2 528 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 H0YGN5 161 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 PRDX6P30041 224 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 TIGD6Q17RP2 521 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 ZYG11AQ6WRX3 759 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 FAM71AQ8IYT1 594 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 UNC5BQ8IZJ1 945 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 PSD4Q8NDX1 1056 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 ESAMQ96AP7 390 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 C1QTNF1Q9BXJ1 281 aa7.8□□□□□ -1.16
VANGL1-202ENST00000355485 C3orf14Q9HBI5 128 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms