RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 FAM234BA2RU67 622 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 KPNA3O00505 521 aaPredicted RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 PABPC4LP0CB38 370 aaKnown RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ANXA8P13928 327 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 TUFMP49411 452 aaKnown RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 RAP1GAP2Q684P5 730 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 GPALPP1Q8IXQ4 340 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 MGME1Q9BQP7 344 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 WDR18Q9BV38 432 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 COMMD3Q9UBI1 195 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 PIP5K1BO14986 540 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 URODP06132 367 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 PRPS2P11908 318 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 FOSL2P15408 326 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF234Q14588 700 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF404Q494X3 552 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 IQCCQ4KMZ1 466 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 FAM171BQ6P995 826 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 FSTL5Q8N475 847 aaPredicted RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 VANGL1Q8TAA9 524 aaPredicted RBP12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 CANT1Q8WVQ1 401 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 COL26A1Q96A83 441 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 BIRC8Q96P09 236 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 CHRAC1Q9NRG0 131 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 DNAJC11Q9NVH1 559 aa12.6□□□□□ -0.39
SYNCRIP-201ENST00000355238 ALDH2P05091 517 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 ERP29P30040 261 aaKnown RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 TMBIM6P55061 237 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 TCEA2Q15560 299 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 CMPK2Q5EBM0 449 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 XKR5Q6UX68 686 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 C8orf48Q96LL4 319 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 KCTD7Q96MP8 289 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 GTPBP2Q9BX10 602 aaKnown RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 POLR2J2Q9GZM3 115 aaKnown RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 ATP13A3Q9H7F0 1226 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 SPG21Q9NZD8 308 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 ABCB7O75027 752 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF286BP0CG31 522 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 CKBP12277 381 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 PORP16435 677 aaPredicted RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 CDH12P55289 794 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 SNRPD1P62314 119 aaKnown RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 IFI44LQ53G44 452 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 BTN2A1Q7KYR7 527 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 LSM14AQ8ND56 463 aaKnown RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC38A4Q969I6 547 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 RAD51AP1Q96B01 352 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 ISOC1Q96CN7 298 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 C12orf66Q96MD2 445 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 C3orf14Q9HBI5 128 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 PCDHGA4Q9Y5G9 962 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 UBIAD1Q9Y5Z9 338 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 WNT7AO00755 349 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 POMCP01189 267 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 CBX5P45973 191 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 FOXM1Q08050 763 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 ASTE1Q2TB18 679 aaPredicted RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 DET1Q7L5Y6 550 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 BRD9Q9H8M2 597 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 RDH8Q9NYR8 311 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 HMGXB4Q9UGU5 601 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 TMEM59LQ9UK28 342 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 MGAT4AQ9UM21 535 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 KANTRA0A1W2PQU2 76 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 FBP2O00757 339 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 PCDH8O95206 1070 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC39A12Q504Y0 691 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 WSCD1Q658N2 575 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 PM20D2Q8IYS1 436 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 FRMD6Q96NE9 622 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 NFKBIZQ9BYH8 718 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 CHIAQ9BZP6 476 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 ACSS2Q9NR19 701 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 HACL1Q9UJ83 578 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 PTCH2Q9Y6C5 1203 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 SH3PXD2BA1X283 911 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 CLDN9O95484 217 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 ICAM3P32942 547 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 PLD1Q13393 1074 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 TGFBIQ15582 683 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 INTS5Q6P9B9 1019 aaKnown RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 OR52J3Q8NH60 311 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 RAET1EQ8TD07 263 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF431Q8TF32 576 aaPredicted RBP12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 OR2B2Q9GZK3 357 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 CDT1Q9H211 546 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 TCAF1Q9Y4C2 921 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 DISP2A7MBM2 1401 aa12.59□□□□□ -0.39
SYNCRIP-201ENST00000355238 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 hCG_2039718K7EN88 272 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 CCNDBP1O95273 360 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 LYPLA2O95372 231 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 HOXC6P09630 235 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 RXRBP28702 533 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 RBM34P42696 430 aaKnown RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 MAXP61244 160 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms