RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 LAMB3Q13751 1172 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 C3orf38Q5JPI3 329 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.5■□□□□ 0.55
VPS72-201ENST00000354473 TAS2R42Q7RTR8 314 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 SLC9B2Q86UD5 537 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 AMZ2Q86W34 360 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 PROSER1Q86XN7 944 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 BEND7Q8N7W2 519 aaPredicted RBP18.5■□□□□ 0.55
VPS72-201ENST00000354473 ZNF514Q96K75 400 aaPredicted RBP18.5■□□□□ 0.55
VPS72-201ENST00000354473 RANBP9Q96S59 729 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 COPS8Q99627 209 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 RDH14Q9HBH5 336 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 EPB41L5Q9HCM4 733 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 SARS2Q9NP81 518 aaKnown RBP18.5■□□□□ 0.55
VPS72-201ENST00000354473 SCHIP1Q9P0W5 487 aaPredicted RBP18.5■□□□□ 0.55
VPS72-201ENST00000354473 SATB2Q9UPW6 733 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 FREM2Q5SZK8 3169 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 ASPMQ8IZT6 3477 aa18.5■□□□□ 0.55
VPS72-201ENST00000354473 TRBV5-4A0A0C4DH59 114 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 CFAP99D6REC4 459 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 TAF4O00268 1085 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 BRINP1O60477 761 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 PHF2O75151 1096 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 KRT14P02533 472 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 PRSS56P0CW18 603 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 RALBP11234 206 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 TCP1P17987 556 aaKnown RBP18.49■□□□□ 0.55
VPS72-201ENST00000354473 IDSP22304 550 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 ADRA1DP25100 572 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 PSMA3P25788 255 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 ACRV1P26436 265 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 RPL10P27635 214 aaKnown RBP18.49■□□□□ 0.55
VPS72-201ENST00000354473 TERF1P54274 439 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 DRG2P55039 364 aaKnown RBP18.49■□□□□ 0.55
VPS72-201ENST00000354473 INHBCP55103 352 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 SESN2P58004 480 aaPredicted RBP18.49■□□□□ 0.55
VPS72-201ENST00000354473 GABREP78334 506 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 CACNG1Q06432 222 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 GPS1Q13098 491 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 TSTD2Q5T7W7 516 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 CCDC137Q6PK04 289 aaKnown RBP18.49■□□□□ 0.55
VPS72-201ENST00000354473 TMPRSS9Q7Z410 1059 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 AVL9Q8NBF6 648 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 PPHLN1Q8NEY8 458 aaKnown RBP18.49■□□□□ 0.55
VPS72-201ENST00000354473 OR13J1Q8NGT2 312 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 SLC38A3Q99624 504 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 POLR1BQ9H9Y6 1135 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 CPNE7Q9UBL6 633 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 SLC2A6Q9UGQ3 507 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.49■□□□□ 0.55
VPS72-201ENST00000354473 IGHV1OR21-1A0A087WYE8 117 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 A0A1W2PNU3 283 aaPredicted RBP18.49■□□□□ 0.55
VPS72-201ENST00000354473 CCDC162PA2VCL2 907 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 OR51F1A6NGY5 319 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 KCNJ13O60928 360 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 CPNE6O95741 557 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 BRAFP15056 766 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 TPSB2P20231 275 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 CD1CP29017 333 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 DMPKQ09013 629 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 NFE2L1Q14494 772 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 TPSAB1Q15661 275 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 BCL7AQ4VC05 210 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 AGAP9Q5VTM2 703 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 NKAIN2Q5VXU1 208 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 FAM83HQ6ZRV2 1179 aaPredicted RBP18.49■□□□□ 0.55
VPS72-201ENST00000354473 USP53Q70EK8 1073 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 PIM3Q86V86 326 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 SERPINA9Q86WD7 417 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 TRIM48Q8IWZ4 208 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 PIANPQ8IYJ0 282 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 HEXDCQ8WVB3 486 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 LIN37Q96GY3 246 aaPredicted RBP18.49■□□□□ 0.55
VPS72-201ENST00000354473 ZNF778Q96MU6 729 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 TMEM74Q96NL1 305 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 NUDT22Q9BRQ3 303 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 STRADBQ9C0K7 418 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 ZMYND15Q9H091 742 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 ZDHHC3Q9NYG2 299 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 TCAF1Q9Y4C2 921 aa18.49■□□□□ 0.55
VPS72-201ENST00000354473 DNMT3AQ9Y6K1 912 aaPredicted RBP18.49■□□□□ 0.55
VPS72-201ENST00000354473 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.48■□□□□ 0.55
VPS72-201ENST00000354473 IGLV3-16A0A075B6K0 115 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 CCDC187A0A096LP49 1063 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 PMS2P1A4D2B8 440 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 TMX2-CTNND1H3BSU7 103 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 SGTAO43765 313 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 CCKBRP32239 447 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 LSSP48449 732 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 FNTAP49354 379 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 PPM1FP49593 454 aaPredicted RBP18.48■□□□□ 0.55
VPS72-201ENST00000354473 UBE2IP63279 158 aaKnown RBP18.48■□□□□ 0.55
VPS72-201ENST00000354473 CRADDP78560 199 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 CDK16Q00536 496 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 DBN1Q16643 649 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 PHF19Q5T6S3 580 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 ABRAXAS1Q6UWZ7 409 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 WASH2PQ6VEQ5 465 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 NLRP9Q7RTR0 991 aa18.48■□□□□ 0.55
VPS72-201ENST00000354473 OR10G6Q8NH81 332 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms