RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 TEX28O15482 410 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 RGS5O15539 181 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 AIREO43918 545 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 MAFO75444 373 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 ALX3O95076 343 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 NTRK1P04629 796 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 MATKP42679 507 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 CHRNA4P43681 627 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 ATP4BP51164 291 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 POLR2JP52435 117 aaKnown RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 GABARAPL2P60520 117 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 CDC20Q12834 499 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 KRR1Q13601 381 aaKnown RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 ENPP6Q6UWR7 440 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 PRR23CQ6ZRP0 262 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 ZDHHC17Q8IUH5 632 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 ACTR8Q9H981 624 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 POLG2Q9UHN1 485 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 TEKT2Q9UIF3 430 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 MAGEL2Q9UJ55 1249 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 ARIH1Q9Y4X5 557 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 SIPA1L1O43166 1804 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 MITFO75030 526 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 CDK14O94921 469 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 DNTTP04053 509 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 LCKP06239 509 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 MYL3P08590 195 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 HSMCR30P0CW71 290 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 HRH2P25021 359 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 EEFSECP57772 596 aaKnown RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 CDK5R2Q13319 367 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 RAPSNQ13702 412 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 ACAP2Q15057 778 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 UNC50Q53HI1 259 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF678Q5SXM1 525 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 ARMC4Q5T2S8 1044 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 AGAP6Q5VW22 663 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 BEND5Q7L4P6 421 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 PIM3Q86V86 326 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 HORMAD1Q86X24 394 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 FAM126BQ8IXS8 530 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 DTWD1Q8N5C7 304 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 AMER2Q8N7J2 671 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 FNDC5Q8NAU1 212 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 SLC2A14Q8TDB8 520 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 SLC47A1Q96FL8 570 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 TEX37Q96LM6 180 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 AGAP4Q96P64 663 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 MED10Q9BTT4 135 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 TRMOQ9BU70 441 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 MINDY3Q9H8M7 445 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 TOR4AQ9NXH8 423 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 EHD3Q9NZN3 535 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 TRHDEQ9UKU6 1024 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 SNX6Q9UNH7 406 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 COMMD10Q9Y6G5 202 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 RGS10O43665 173 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 SSX4O60224 188 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 PTTG1O95997 202 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 GOT2P00505 430 aaKnown RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 CYBBP04839 570 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 CYP2C8P10632 490 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 RABGGTBP53611 331 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 RBBP7Q16576 425 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 SLC25A52Q3SY17 297 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 TBRG1Q3YBR2 411 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 NOMO2Q5JPE7 1267 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 TJAP1Q5JTD0 557 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 HECTD2Q5U5R9 776 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 EFCAB12Q6NXP0 572 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 NEK10Q6ZWH5 1172 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 GDPD3Q7L5L3 318 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 SLC38A6Q8IZM9 456 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 FAM86B1Q8N7N1 296 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 EMID1Q96A84 441 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 MED30Q96HR3 178 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 MBOAT4Q96T53 435 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 HBEGFQ99075 208 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 RHNO1Q9BSD3 238 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 KIFC1Q9BW19 673 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF717Q9BY31 904 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 LRRC3Q9BY71 257 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 NIFKQ9BYG3 293 aaKnown RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 CDH9Q9ULB4 789 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 RABL2BQ9UNT1 228 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 AKT3Q9Y243 479 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 USP3Q9Y6I4 520 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 A0A1W2PQ72 361 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 TYW5A2RUC4 315 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ASB14A6NK59 587 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 CPNE3O75131 537 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 TULP3O75386 442 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ABCB1P08183 1280 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 KCNC1P48547 511 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 CXCR3P49682 368 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 NRG1Q02297 640 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 FOXD4Q12950 439 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SMN1Q16637 294 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 PLA2G4EQ3MJ16 856 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SYPL2Q5VXT5 272 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms