RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 A0A0J9YYE9 177 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 SYCE1LA8MT33 242 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 CACNG3O60359 315 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 SEC22BO75396 215 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 PRAMEF12O95522 483 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 CLPTM1O96005 669 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 SNRPB2P08579 225 aaKnown RBP10.29□□□□□ -0.76
SMPD4-201ENST00000351288 HSPA8P11142 646 aaKnown RBP10.29□□□□□ -0.76
SMPD4-201ENST00000351288 PAX3P23760 479 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 MYBPC1Q00872 1141 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 SMARCB1Q12824 385 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 CHRNA6Q15825 494 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 CMPK2Q5EBM0 449 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 C11orf96Q7Z7L8 435 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 TRAPPC5Q8IUR0 188 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 PCYOX1LQ8NBM8 494 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 RDH11Q8TC12 318 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 TWIST2Q8WVJ9 160 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 PRICKLE1Q96MT3 831 aaPredicted RBP10.29□□□□□ -0.76
SMPD4-201ENST00000351288 PSKH2Q96QS6 385 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 ZBTB18Q99592 522 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 CCL26Q9Y258 94 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 AP4S1Q9Y587 144 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 GREB1Q4ZG55 1949 aa10.29□□□□□ -0.76
SMPD4-201ENST00000351288 GLYATL1P3A0A0U1RQE8 302 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 ILVBLA1L0T0 632 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 HIDE1A8MVS5 230 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 ACOT8O14734 319 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 NRP2O60462 931 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 H2AFYO75367 372 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 PCDH8O95206 1070 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 ATP5BP06576 529 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 PCNAP12004 261 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 LEPRP48357 1165 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 MAPK10P53779 464 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 FAM189BP81408 668 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 PLOD1Q02809 727 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 PPP1R8Q12972 351 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 KRT33BQ14525 404 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 GSTA3Q16772 222 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 NADK2Q4G0N4 442 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 FNDC3BQ53EP0 1204 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 ZNF678Q5SXM1 525 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 OGFRL1Q5TC84 451 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 CCDC149Q6ZUS6 474 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 GET4Q7L5D6 327 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 METTL25Q8N6Q8 603 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 MDGA1Q8NFP4 955 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 TMIGD2Q96BF3 282 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 CNDP1Q96KN2 507 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 CENPKQ9BS16 269 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 ZNF385DQ9H6B1 395 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 C11orf49Q9H6J7 331 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 CXXC1Q9P0U4 656 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 SCN10AQ9Y5Y9 1956 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 UPK3BL1B0FP48 263 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 UPK3BL2E5RIL1 263 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 ECI2O75521 394 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 PARNO95453 639 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 GNAO1P09471 354 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 MYOGP15173 224 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 PPM1AP35813 382 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 CSRP3P50461 194 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 LBX1P52954 281 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 RPL38P63173 70 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 CLCQ05315 142 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 LMAN2Q12907 356 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 SLC5A9Q2M3M2 681 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 PGS1Q32NB8 556 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 TRMT11Q7Z4G4 463 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 TRIM74Q86UV6 250 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 RALGPS2Q86X27 583 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 YAF2Q8IY57 180 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 BEND7Q8N7W2 519 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 SMG7Q92540 1137 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 SNX19Q92543 992 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 ELMO1Q92556 727 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 KLK6Q92876 244 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 TUBB1Q9H4B7 451 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 ZNF711Q9Y462 761 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 ZNF236Q9UL36 1845 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 SLCO1B7G3V0H7 640 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 FESP07332 822 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 CAPN3P20807 821 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 ATP6V1B2P21281 511 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 HOXD9P28356 352 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 VIPR2P41587 438 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 TIAL1Q01085 375 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 HMGCS1Q01581 520 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 TRIM25Q14258 630 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 SKIV2LQ15477 1246 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 MAPRE2Q15555 327 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 LRRC26Q2I0M4 334 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 OTUD3Q5T2D3 398 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 CRTC3Q6UUV7 619 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 RFLNAQ6ZTI6 216 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 KIAA0408Q6ZU52 694 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 CHST9Q7L1S5 443 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 MPP4Q96JB8 637 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 UBXN10Q96LJ8 280 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms