RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ZNF404Q494X3 552 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 FAM98BQ52LJ0 330 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 ERAP2Q6P179 960 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 RPS27LQ71UM5 84 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 GALNT7Q86SF2 657 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 RALGPS2Q86X27 583 aaPredicted RBP10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 PLD3Q8IV08 490 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 SIX5Q8N196 739 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 METTL4Q8N3J2 472 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 NAT16Q8N8M0 369 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 PPHLN1Q8NEY8 458 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 PPTC7Q8NI37 304 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 LGALS12Q96DT0 336 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 RPL10LQ96L21 214 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 DHRS9Q9BPW9 319 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 RBM4BQ9BQ04 359 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 RBM4Q9BWF3 364 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 PRKD2Q9BZL6 878 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 CCDC90BQ9GZT6 254 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 MROH8Q9H579 483 aa10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 KAT8Q9H7Z6 458 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-202ENST00000348749 LOC100130705A0A1B0GUX0 176 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 PTGES3LE9PB15 166 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 H0Y626 953 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 FZD9O00144 591 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 EEDO75530 441 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 MFN2O95140 757 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 SNX4O95219 450 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 TRIM16O95361 564 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 NPPAP01160 153 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 VTNP04004 478 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 FYNP06241 537 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 FGF4P08620 206 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 LTA4HP09960 611 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 KCNE1P15382 129 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 CD6P30203 668 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 IFNA8P32881 189 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 CYP2C18P33260 490 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 DDOSTP39656 456 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 HTR3AP46098 478 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 SEPHS1P49903 392 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 ST13P50502 369 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 CCNA1P78396 465 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 MRPS15P82914 257 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 MVKQ03426 396 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 EMX2Q04743 252 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 PRKCDQ05655 676 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 GRIK2Q13002 908 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 CSHL1Q14406 222 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 CLCA4Q14CN2 919 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 EML3Q32P44 896 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 ZFP69Q49AA0 526 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 XKR4Q5GH76 650 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 CEP78Q5JTW2 689 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 COLEC12Q5KU26 742 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 VARS2Q5ST30 1063 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 KIAA0930Q6ICG6 404 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 NOTUMQ6P988 496 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 GDPD3Q7L5L3 318 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 DENND6AQ8IWF6 608 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 FBXO16Q8IX29 292 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 FAM20CQ8IXL6 584 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 UBQLNLQ8IYU4 475 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 BEND7Q8N7W2 519 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 B3GALNT2Q8NCR0 500 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 C2CD4AQ8NCU7 369 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 FAM83FQ8NEG4 500 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 DNAJB14Q8TBM8 379 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 MCOLN3Q8TDD5 553 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 TSPAN17Q96FV3 270 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 ASB2Q96Q27 587 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 DEPDC7Q96QD5 511 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 FCRL5Q96RD9 977 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 TRIM8Q9BZR9 551 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 NXF2Q9GZY0 626 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 SMOC2Q9H3U7 446 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 WDR6Q9NNW5 1121 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 PIGVQ9NUD9 493 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 PCDHGA10Q9Y5H3 936 aa10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 MAGED1Q9Y5V3 778 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-202ENST00000348749 MCM3APO60318 1980 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 ASPDHA6ND91 283 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 CENPXA8MT69 81 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 PDZK1P1A8MUH7 402 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 CCRL2O00421 344 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 SLC16A6O15403 523 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 ZW10O43264 779 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 TPH1P17752 444 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 LBPP18428 481 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 CCNCP24863 283 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 PKLRP30613 574 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 MTHFRP42898 656 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 APLP1P51693 650 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 SLC12A2P55011 1212 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 DEFA1P59665 94 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 DEFA3P59666 94 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 RACK1P63244 317 aaKnown RBP10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 NFKB2Q00653 900 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 CDK5R2Q13319 367 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 CTBP1Q13363 440 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms