RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 SYTL2Q9HCH5 934 aa12.7□□□□□ -0.38
CLK3-201ENST00000345005 TAS2R13Q9NYV9 303 aa12.7□□□□□ -0.38
CLK3-201ENST00000345005 EPS15L1Q9UBC2 864 aa12.7□□□□□ -0.38
CLK3-201ENST00000345005 XPR1Q9UBH6 696 aa12.7□□□□□ -0.38
CLK3-201ENST00000345005 KIAA1549LQ6ZVL6 1849 aa12.7□□□□□ -0.38
CLK3-201ENST00000345005 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 RFXAPO00287 272 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 TULP3O75386 442 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 RHOBTB1O94844 696 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 CLDN7O95471 211 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 CAPNS1P04632 268 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 UGT2B4P06133 528 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 ARSAP15289 507 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 CD9P21926 228 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 CDKN1CP49918 316 aaPredicted RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 NR1H2P55055 460 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 ADARP55265 1226 aaKnown RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 ST8SIA6P61647 398 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 TIAL1Q01085 375 aaKnown RBP eCLIP12.69□□□□□ -0.382e-7■■■■■ 33.6
CLK3-201ENST00000345005 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 CYLC2Q14093 348 aaPredicted RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 PTPRNQ16849 979 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 TECRLQ5HYJ1 363 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 GRAMD4Q6IC98 578 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 ANKRD54Q6NXT1 300 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 BRAT1Q6PJG6 821 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 SPATA6LQ8N4H0 392 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 FRS2Q8WU20 508 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 CYB5D2Q8WUJ1 264 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 VOPP1Q96AW1 172 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 DCUN1D1Q96GG9 259 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 APOL5Q9BWW9 433 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 CIPCQ9C0C6 399 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 COG4Q9H9E3 785 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 ZFP14Q9HCL3 533 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 TCF7L2Q9NQB0 619 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 DNAAF2Q9NVR5 837 aaKnown RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 PNPOQ9NVS9 261 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 FNDC3AQ9Y2H6 1198 aaKnown RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 PLXNB3Q9ULL4 1909 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 A0A0U1RQS6 177 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 GOLGA8CPA6NN73 597 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 H3BNX3 289 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 DLX3O60479 287 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 LYPLA1O75608 230 aaPredicted RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 FAM58BPP0C7Q3 252 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 PKMP14618 531 aaKnown RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 ATP5F1P24539 256 aaPredicted RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 NFKBIAP25963 317 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 HYAL1Q12794 435 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 ADGRE1Q14246 886 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 MYBPC3Q14896 1274 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 TCEAL5Q5H9L2 206 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 LYPLAL1Q5VWZ2 237 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 CRTC1Q6UUV9 634 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 TMEM207Q6UWW9 146 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 BNC2Q6ZN30 1099 aaPredicted RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 FRMD7Q6ZUT3 714 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 ZSWIM9Q86XI8 627 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 ETFBKMTQ8IXQ9 262 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 POU5F2Q8N7G0 328 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 CHST14Q8NCH0 376 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 ASIC4Q96FT7 647 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 LRIG1Q96JA1 1093 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 CATSPER2Q96P56 530 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 MCCC1Q96RQ3 725 aaPredicted RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 GATA5Q9BWX5 397 aaPredicted RBP12.69□□□□□ -0.38
CLK3-201ENST00000345005 EFCAB1Q9HAE3 211 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 ELOVL2Q9NXB9 296 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 DEC1Q9P2X7 70 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 CDH7Q9ULB5 785 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 RAP2CQ9Y3L5 183 aa12.69□□□□□ -0.38
CLK3-201ENST00000345005 TTC34A8MYJ7 566 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 DCXO43602 365 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 DNAJA2O60884 412 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 VPS26AO75436 327 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 PDE5AO76074 875 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 ESR1P03372 595 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 ITGALP20701 1170 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 SPAM1P38567 509 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 DNAJB13P59910 316 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 PFKPQ01813 784 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 LRRC36Q1X8D7 754 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 GPR33Q49SQ1 333 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 ATAT1Q5SQI0 421 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 C1QTNF12Q5T7M4 302 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 ZDHHC20Q5W0Z9 365 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 SYCE2Q6PIF2 218 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 FAM151BQ6UXP7 276 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 NAPRTQ6XQN6 538 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 RNF111Q6ZNA4 994 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 SNX20Q7Z614 316 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 PIM3Q86V86 326 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 HPS6Q86YV9 775 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 PGAM4Q8N0Y7 254 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 ANKRD49Q8WVL7 239 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 SORCS1Q8WY21 1168 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 TIFAQ96CG3 184 aa12.68□□□□□ -0.38
CLK3-201ENST00000345005 CCDC124Q96CT7 223 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms