RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CPQQ9Y646 472 aa14.72□□□□□ -0.05
VIPAS39-202ENST00000343765 C1orf232A0A0U1RR37 186 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 DHRS12A0PJE2 317 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 TYW5A2RUC4 315 aaKnown RBP14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 CCDC154A6NI56 674 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 PRMT5O14744 637 aaPredicted RBP14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 BNIP3LO60238 219 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 SLC22A3O75751 556 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 ABLIM3O94929 683 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 TRIM16O95361 564 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 CAPNS1P04632 268 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 CAPN1P07384 714 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 PABPC4LP0CB38 370 aaKnown RBP14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 OXTRP30559 389 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 PLIN5Q00G26 463 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 XKR7Q5GH72 579 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 PRMT9Q6P2P2 845 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 ZBTB49Q6ZSB9 765 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 SPATA19Q7Z5L4 167 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 SERPINA9Q86WD7 417 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 MFN1Q8IWA4 741 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 LKAAEAR1Q8TD35 194 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 NMD3Q96D46 503 aaKnown RBP14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 TNKS2Q9H2K2 1166 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 ZMYM5Q9UJ78 669 aa14.71□□□□□ -0.05
VIPAS39-202ENST00000343765 A0A1W2PP18 115 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 PDLIM1O00151 329 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 SOCS2O14508 198 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 ARPC2O15144 300 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 TFAP2AP05549 437 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 UGT1A1P22309 533 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 UGT1A4P22310 534 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 PSMA3P25788 255 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 UGT1A3P35503 534 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 UGT1A5P35504 534 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 CLCN4P51793 760 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 IL27RAQ6UWB1 636 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 METTL25Q8N6Q8 603 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 SLAIN1Q8ND83 568 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 METTL6Q8TCB7 284 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 DDI1Q8WTU0 396 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 TMEM79Q9BSE2 394 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 NUSAP1Q9BXS6 441 aaKnown RBP14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 CLPBQ9H078 707 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 P2RY12Q9H244 342 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 SLC52A3Q9NQ40 469 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 XIRP2A4UGR9 3374 aa14.71□□□□□ -0.06
VIPAS39-202ENST00000343765 GBF1Q92538 1859 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 INPP4BO15327 924 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 PRR35P0CG20 571 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 IL12AP29459 219 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 PIK3CGP48736 1102 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 POLR2JP52435 117 aaKnown RBP14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 CYP4F8P98187 520 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 RCAN2Q14206 197 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 AAK1Q2M2I8 961 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 ATP6AP1LQ52LC2 224 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 C6orf136Q5SQH8 315 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 OGFOD2Q6N063 350 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 TPGS1Q6ZTW0 290 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 AHI1Q8N157 1196 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 HJURPQ8NCD3 748 aaPredicted RBP14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 TMEM169Q96HH4 297 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 ZNF597Q96LX8 424 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 C1QTNF3Q9BXJ4 246 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 ABCG8Q9H221 673 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 NSUN3Q9H649 340 aaKnown RBP14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 ASB8Q9H765 288 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 INTS7Q9NVH2 962 aaKnown RBP14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 HACD3Q9P035 362 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 SUN2Q9UH99 717 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 PRSS21Q9Y6M0 314 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 H7C0S8 307 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 FZD6O60353 706 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 PGLSO95336 258 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 CLDN7O95471 211 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 EFEMP2O95967 443 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 MT-ND1P03886 318 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 SOD2P04179 222 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 ZFP36L2P47974 494 aaKnown RBP14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 HSPA7P48741 367 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 GSK3BP49841 420 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 ERVK-8P63133 956 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 DEFB115Q30KQ5 88 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 NADK2Q4G0N4 442 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 PABPC1LQ4VXU2 614 aaKnown RBP14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 INO80DQ53TQ3 878 aaPredicted RBP14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 SLC2A7Q6PXP3 512 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 RBM44Q6ZP01 1051 aaKnown RBP14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 GOLGA7Q7Z5G4 137 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 ADAMTS19Q8TE59 1207 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 TMEM125Q96AQ2 219 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 DEFB118Q96PH6 123 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 C17orf80Q9BSJ5 609 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 TRIM15Q9C019 465 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 ALG2Q9H553 416 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 RIC8BQ9NVN3 520 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 CLEC4EQ9ULY5 219 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 DHRS7Q9Y394 339 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms