RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 TTYH2Q9BSA4 534 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 TNKS2Q9H2K2 1166 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 MMP27Q9H306 513 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 COPRSQ9NQ92 184 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 DNAJC28Q9NX36 388 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ENTPD6O75354 484 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 WDPCPO95876 746 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PROZP22891 400 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 FNTBP49356 437 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SLC7A2P52569 658 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SPOCK1Q08629 439 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 NADK2Q4G0N4 442 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 DCDC5Q6ZRR9 648 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ANKRD13BQ86YJ7 626 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SLC7A6OSQ96CW6 309 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 RNF31Q96EP0 1072 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ZSWIM3Q96MP5 696 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 FUZQ9BT04 418 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 LMAN2LQ9H0V9 348 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PDP1Q9P0J1 537 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 MINPP1Q9UNW1 487 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SDK2Q58EX2 2172 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 GAKO14976 1311 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CBY3A6NI87 242 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 F8W036 122 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 FBXO21O94952 628 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 FABP3P05413 133 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CD36P16671 472 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 TAF6P49848 677 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 BLOC1S1P78537 153 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 RBP5P82980 135 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 POU6F1Q14863 301 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CRTC2Q53ET0 693 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 FIGNQ5HY92 759 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 KANK2Q63ZY3 851 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 GPAT2Q6NUI2 795 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PACRGLQ8N7B6 248 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CORO1BQ9BR76 489 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 MKRN2Q9H000 416 aaKnown RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 TBC1D17Q9HA65 648 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SLC52A2Q9HAB3 445 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ZNF302Q9NR11 478 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 NOP16Q9Y3C1 178 aaKnown RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 TIMM8BQ9Y5J9 83 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 ZNF335Q9H4Z2 1342 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 A0A0G2JMP0 313 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PDYNP01213 254 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PCSK1P29120 753 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 MVKQ03426 396 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 GNMTQ14749 295 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 RAB35Q15286 201 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ZNHIT3Q15649 155 aaPredicted RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 IQCCQ4KMZ1 466 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 METTL21CQ5VZV1 264 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SERPINA13PQ6UXR4 307 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 NRROSQ86YC3 692 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 FAM98AQ8NCA5 519 aaKnown RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 OR4M2Q8NGB6 313 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SNTG1Q9NSN8 517 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 MALRD1Q5VYJ5 2156 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 SIPA1L1O43166 1804 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 A0A1B0GVI7 797 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 DNAJB5O75953 348 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 UGT2B10P36537 528 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 DGKQP52824 942 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PDX1P52945 283 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ERVK-24P63145 666 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CRY1Q16526 586 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 FSCN1Q16658 493 aaKnown RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 CORO6Q6QEF8 472 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ZC3HC1Q86WB0 502 aaKnown RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 EPS8L1Q8TE68 723 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CDADC1Q9BWV3 514 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 FOLH1BQ9HBA9 442 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CMAHPQ9Y471 501 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PCDHGB1Q9Y5G3 927 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 ARFGEF1Q9Y6D6 1849 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 PALLDQ8WX93 1383 aa6.12□□□□□ -1.43
VCAN-203ENST00000343200 CPSF1Q10570 1443 aaKnown RBP6.12□□□□□ -1.43
VCAN-203ENST00000343200 GXYLT2A0PJZ3 443 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 CCDC85CA6NKD9 419 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 DPYSL4O14531 572 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 HDAC3O15379 428 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 CYTIPO60759 359 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 PABPC4LP0CB38 370 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 NELFEP18615 380 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 CDC42EP1Q00587 391 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SLC18A2Q05940 514 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 SPATA2LQ8IUW3 424 aaPredicted RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 UNC5CLQ8IV45 518 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 C11orf65Q8NCR3 313 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SEMA6DQ8NFY4 1073 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ERLEC1Q96DZ1 483 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 S100A16Q96FQ6 103 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 IFT27Q9BW83 186 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SAMD10Q9BYL1 202 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZCCHC2Q9C0B9 1178 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 TRHDEQ9UKU6 1024 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 KIAA1257Q9ULG3 409 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms