RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 DYTNA2CJ06 578 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 STX16-NPEPL1H3BU86 382 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 STX16O14662 325 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 IDH3BO43837 385 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 IL12RB1P42701 662 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 CARD16Q5EG05 197 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 LRRC73Q5JTD7 316 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 ZNF567Q8N184 647 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 CPSF7Q8N684 471 aaKnown RBP14.87□□□□□ -0.03
UBE3B-202ENST00000342494 OR2AG1Q9H205 316 aa14.87□□□□□ -0.03
UBE3B-202ENST00000342494 CPED1A4D0V7 1026 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 NRP2O60462 931 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 RBMXL2O75526 392 aaKnown RBP14.86□□□□□ -0.03
UBE3B-202ENST00000342494 PLEKHG4Q58EX7 1191 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 ERICH5Q6P6B1 374 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 GALNT7Q86SF2 657 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 TNFRSF25Q93038 417 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 FBXW11Q9UKB1 542 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 CYP4B1P13584 511 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 CSKP41240 450 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 NSG1P42857 185 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 PDX1P52945 283 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 GRB14Q14449 540 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 TSTD2Q5T7W7 516 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 AMIGO2Q86SJ2 522 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 HOPXQ9BPY8 73 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-202ENST00000342494 YIPF1Q9Y548 306 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 IGLV3-22A0A075B6J6 115 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 MT-CYBP00156 380 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-202ENST00000342494 CDKN2BP42772 138 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 POLR2JP52435 117 aaKnown RBP14.86□□□□□ -0.03
UBE3B-202ENST00000342494 PNLIPRP1P54315 467 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 GTF2H2Q13888 395 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 TBC1D25Q3MII6 688 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 GTF2H2CQ6P1K8 395 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 ALYREFQ86V81 257 aaKnown RBP14.86□□□□□ -0.03
UBE3B-202ENST00000342494 AMZ2Q86W34 360 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 SFRP1Q8N474 314 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 KBTBD8Q8NFY9 601 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 TWIST2Q8WVJ9 160 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 SIPA1Q96FS4 1042 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 PDCD10Q9BUL8 212 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 TDRD1Q9BXT4 1180 aaKnown RBP14.86□□□□□ -0.03
UBE3B-202ENST00000342494 LRRC4CQ9HCJ2 640 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-202ENST00000342494 B3GALT2O43825 422 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 KHDRBS3O75525 346 aaKnown RBP14.86□□□□□ -0.03
UBE3B-202ENST00000342494 UNC5CO95185 931 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 PRR5P85299 388 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 ENPP7Q6UWV6 458 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 PIK3C3Q8NEB9 887 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 TCF12Q99081 682 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 NPAS2Q99743 824 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 WDR26Q9H7D7 661 aa14.86□□□□□ -0.03
UBE3B-202ENST00000342494 YJEFN3A6XGL0 299 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 C8GP07360 202 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 TTKP33981 857 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 NDUFA5Q16718 116 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 NAIF1Q69YI7 327 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-202ENST00000342494 TTC27Q6P3X3 843 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 ZNF662Q6ZS27 426 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 TRABD2AQ86V40 505 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 KBTBD2Q8IY47 623 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 DCBLD1Q8N8Z6 715 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 SCAMP5Q8TAC9 235 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 SLC44A1Q8WWI5 657 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 PPM1MQ96MI6 270 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 GTPBP2Q9BX10 602 aaKnown RBP14.85□□□□□ -0.03
UBE3B-202ENST00000342494 SLC17A7Q9P2U7 560 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 CKLFQ9UBR5 152 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 ESR1P03372 595 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 HOXB6P17509 224 aaKnown RBP14.85□□□□□ -0.03
UBE3B-202ENST00000342494 KCNA5P22460 613 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 CCKBRP32239 447 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 PTGER3P43115 390 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 SULT1C3Q6IMI6 304 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 NUS1Q96E22 293 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 MFSD3Q96ES6 412 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 DPYSL5Q9BPU6 564 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 NOL6Q9H6R4 1146 aaKnown RBP14.85□□□□□ -0.03
UBE3B-202ENST00000342494 CARS2Q9HA77 564 aaKnown RBP14.85□□□□□ -0.03
UBE3B-202ENST00000342494 ZNF304Q9HCX3 659 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 DNAJC28Q9NX36 388 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 R3HDM2Q9Y2K5 976 aaKnown RBP14.85□□□□□ -0.03
UBE3B-202ENST00000342494 DBTP11182 482 aaKnown RBP14.85□□□□□ -0.03
UBE3B-202ENST00000342494 ECT2LQ008S8 904 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 MED22Q15528 200 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 MREGQ8N565 214 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 RAB11FIP5Q9BXF6 653 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 WDR55Q9H6Y2 383 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-202ENST00000342494 CACNG4Q9UBN1 327 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 PHF11Q9UIL8 331 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 CORO1CQ9ULV4 474 aaPredicted RBP14.85□□□□□ -0.03
UBE3B-202ENST00000342494 BTBD3Q9Y2F9 522 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 DCLK1O15075 740 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 CRHR1P34998 444 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 CTSKP43235 329 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 PSMD7P51665 324 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 PGDP52209 483 aa14.85□□□□□ -0.03
UBE3B-202ENST00000342494 PTPN5P54829 565 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms