RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 SLC35E2BP0CK96 405 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 GRIA4P48058 902 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 ZNF33AQ06730 810 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 FAM83EQ2M2I3 478 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 LRRC66Q68CR7 880 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 KIAA0930Q6ICG6 404 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-201ENST00000342220 FAM124AQ86V42 546 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 CPNE9Q8IYJ1 553 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 ATP6V1E2Q96A05 226 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 TIFAQ96CG3 184 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 ACOX2Q99424 681 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 EGFL8Q99944 293 aa12.94□□□□□ -0.34
COL18A1-201ENST00000342220 GATA5Q9BWX5 397 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-201ENST00000342220 OR2AG2A6NM03 316 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 AIM2O14862 343 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 SOX11P35716 441 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 ACAD11Q709F0 780 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 MMAAQ8IVH4 418 aaKnown RBP12.93□□□□□ -0.34
COL18A1-201ENST00000342220 VN1R2Q8NFZ6 395 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 JADE3Q92613 823 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 ACDQ96AP0 544 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 DGCR14Q96DF8 476 aaKnown RBP12.93□□□□□ -0.34
COL18A1-201ENST00000342220 CCDC28BQ9BUN5 200 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 ZFP14Q9HCL3 533 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 ZDHHC7Q9NXF8 308 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 RWDD3Q9Y3V2 267 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 NPIPB15A6NHN6 443 aaPredicted RBP12.93□□□□□ -0.34
COL18A1-201ENST00000342220 H3BNX3 289 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 GREM1O60565 184 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 UQCRBP14927 111 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 RXRGP48443 463 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 TMED10P49755 219 aaKnown RBP12.93□□□□□ -0.34
COL18A1-201ENST00000342220 NAA20P61599 178 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 MED21Q13503 144 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 ACOX1Q15067 660 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 ATAT1Q5SQI0 421 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 TMEM215Q68D42 235 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 DOK6Q6PKX4 331 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 Q6ZNB5 142 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 Q6ZVL8 140 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 ZSWIM9Q86XI8 627 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 TEX26Q8N6G2 289 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 FIBINQ8TAL6 211 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 ISL2Q96A47 359 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 NLRC5Q86WI3 1866 aa12.93□□□□□ -0.34
COL18A1-201ENST00000342220 SMIM31A0A1B0GVY4 71 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 LOC285095A0A1B0GVY8 99 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 TRIM13O60858 407 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 ATXN3P54252 364 aaPredicted RBP12.92□□□□□ -0.34
COL18A1-201ENST00000342220 CHRNA6Q15825 494 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 MYLK3Q32MK0 819 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 GRAMD1BQ3KR37 738 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 NCEH1Q6PIU2 408 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 CLEC14AQ86T13 490 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 NXPE3Q969Y0 559 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.92□□□□□ -0.342e-6■□□□□ 9.6
COL18A1-201ENST00000342220 CLPBQ9H078 707 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 SUV39H2Q9H5I1 410 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 TCF7L2Q9NQB0 619 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 TRMT6Q9UJA5 497 aaKnown RBP12.92□□□□□ -0.34
COL18A1-201ENST00000342220 UBXN8O00124 270 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 CYP17A1P05093 508 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 VCLP18206 1134 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 EPHA3P29320 983 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 MSX2P35548 267 aaPredicted RBP12.92□□□□□ -0.34
COL18A1-201ENST00000342220 NUDT2P50583 147 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 EMP3P54852 163 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 LRRC8EQ6NSJ5 796 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 FRA10AC1Q70Z53 315 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 CELF5Q8N6W0 485 aaKnown RBP12.92□□□□□ -0.34
COL18A1-201ENST00000342220 BEND7Q8N7W2 519 aaPredicted RBP12.92□□□□□ -0.34
COL18A1-201ENST00000342220 STYXQ8WUJ0 223 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 PPP1R2P1Q96PQ5 205 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 CENPOQ9BU64 300 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 BRD9Q9H8M2 597 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 TREX1Q9NSU2 369 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 NCKIPSDQ9NZQ3 722 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 TBC1D14Q9P2M4 693 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 B4GALT6Q9UBX8 382 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 SH3BGRLO75368 114 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 KATNA1O75449 491 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 KCNA5P22460 613 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 TIE1P35590 1138 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 SGO1Q5FBB7 561 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 UBE2Q1Q7Z7E8 422 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 PATL1Q86TB9 770 aaKnown RBP12.92□□□□□ -0.34
COL18A1-201ENST00000342220 SERPINA9Q86WD7 417 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 SNX32Q86XE0 403 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 IQCF2Q8IXL9 164 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 STK40Q8N2I9 435 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 FNDC8Q8TC99 324 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 CHFRQ96EP1 664 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 ZNF599Q96NL3 588 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 RTKNQ9BST9 563 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 DRC3Q9H069 523 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 SEMA4BQ9NPR2 832 aaPredicted RBP12.92□□□□□ -0.34
COL18A1-201ENST00000342220 CD274Q9NZQ7 290 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 DPP7Q9UHL4 492 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 RNF112Q9ULX5 631 aa12.92□□□□□ -0.34
COL18A1-201ENST00000342220 NOTCH4Q99466 2003 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms