RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 PLA2G4EQ3MJ16 856 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 KCTD8Q6ZWB6 473 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 SLCO6A1Q86UG4 719 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 ZNF540Q8NDQ6 660 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 RDH11Q8TC12 318 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 LEF1Q9UJU2 399 aaPredicted RBP13.39□□□□□ -0.27
TMEM248-201ENST00000341567 TPRKBQ9Y3C4 175 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 A0A1W2PPW3 197 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 CNOT3O75175 753 aaKnown RBP13.39□□□□□ -0.27
TMEM248-201ENST00000341567 KCNH1O95259 989 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 COL2A1P02458 1487 aaPredicted RBP13.39□□□□□ -0.27
TMEM248-201ENST00000341567 ALDOAP04075 364 aaKnown RBP13.39□□□□□ -0.27
TMEM248-201ENST00000341567 FGF3P11487 239 aaPredicted RBP13.39□□□□□ -0.27
TMEM248-201ENST00000341567 POLR2LP62875 67 aaKnown RBP13.39□□□□□ -0.27
TMEM248-201ENST00000341567 SIRPB2Q5JXA9 342 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 GLYATQ6IB77 296 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 ARID1BQ8NFD5 2236 aaPredicted RBP13.39□□□□□ -0.27
TMEM248-201ENST00000341567 PNPT1Q8TCS8 783 aaKnown RBP13.39□□□□□ -0.27
TMEM248-201ENST00000341567 HAPLN3Q96S86 360 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 TCF25Q9BQ70 676 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 MIEF1Q9NQG6 463 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 TRPC4Q9UBN4 977 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 PADI4Q9UM07 663 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 OAZ3Q9UMX2 235 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 TLR6Q9Y2C9 796 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 SLC45A1Q9Y2W3 748 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 CSKP41240 450 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 RPS9P46781 194 aaKnown RBP13.39□□□□□ -0.27
TMEM248-201ENST00000341567 ECT2LQ008S8 904 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 IGSF8Q969P0 613 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 COX4I2Q96KJ9 171 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 COQ6Q9Y2Z9 468 aa13.39□□□□□ -0.27
TMEM248-201ENST00000341567 DDX60Q8IY21 1712 aaKnown RBP13.39□□□□□ -0.27
TMEM248-201ENST00000341567 OR4F21O95013 312 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 CYP2A7P20853 494 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 AQP1P29972 269 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 S100A3P33764 101 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 CHI3L1P36222 383 aaPredicted RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 LIPEQ05469 1076 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 CCNIQ14094 377 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 SPANXN2Q5MJ10 180 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 PAGE2Q7Z2X7 111 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 SYT12Q8IV01 421 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 RAB42Q8N4Z0 105 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 FCRL5Q96RD9 977 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 FBRSL1Q9HCM7 1045 aaKnown RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 SMPD3Q9NY59 655 aaPredicted RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 DDX60LQ5H9U9 1706 aaKnown RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 KLHL33A6NCF5 533 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 MED26O95402 600 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 FTH1P02794 183 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 PRKCHP24723 683 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 PRKAG1P54619 331 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 MRPL28Q13084 256 aaKnown RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 UBASH3BQ8TF42 649 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 ZNF296Q8WUU4 475 aaPredicted RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 ZHX1-C8orf76Q96EF9 292 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 FUBP3Q96I24 572 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 TSPAN18Q96SJ8 248 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 TSEN34Q9BSV6 310 aaKnown RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 CCDC106Q9BWC9 280 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 EURLQ9NYK6 297 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 DYRK1BQ9Y463 629 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 MAGEB3O15480 346 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 FFAR2O15552 330 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 GLDCP23378 1020 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 GPR1P46091 355 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 HPCAP84074 193 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 TCEAL1Q15170 157 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 ANKRD46Q86W74 232 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 ZC3HC1Q86WB0 502 aaKnown RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 TRIM48Q8IWZ4 208 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 GPATCH1Q9BRR8 931 aaKnown RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 C3orf18Q9UK00 162 aa13.38□□□□□ -0.27
TMEM248-201ENST00000341567 POLR3HQ9Y535 204 aaPredicted RBP13.38□□□□□ -0.27
TMEM248-201ENST00000341567 IL4RP24394 825 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 AHI1Q8N157 1196 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 EPS8L2Q9H6S3 715 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 POLR3BQ9NW08 1133 aaPredicted RBP13.37□□□□□ -0.27
TMEM248-201ENST00000341567 EP400Q96L91 3159 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 LRP5O75197 1615 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 GLYATL1P3A0A0U1RQE8 302 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 DLX3O60479 287 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 MYLK3Q32MK0 819 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 SERPINA9Q86WD7 417 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 ADHFE1Q8IWW8 467 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 STK40Q8N2I9 435 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 DRAXINQ8NBI3 349 aaPredicted RBP13.37□□□□□ -0.27
TMEM248-201ENST00000341567 KREMEN2Q8NCW0 462 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 FLCNQ8NFG4 579 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 ZFP28Q8NHY6 868 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 TWIST2Q8WVJ9 160 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 NUAK2Q9H093 628 aa13.37□□□□□ -0.27
TMEM248-201ENST00000341567 RMND5AQ9H871 391 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms