RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 OXNAD1Q96HP4 312 aaPredicted RBP3.48□□□□□ -1.85
CCDC66-202ENST00000341455 HIC2Q96JB3 615 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 FERMT1Q9BQL6 677 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 CENPOQ9BU64 300 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 NUSAP1Q9BXS6 441 aaKnown RBP3.48□□□□□ -1.85
CCDC66-202ENST00000341455 MKRN2Q9H000 416 aaKnown RBP3.48□□□□□ -1.85
CCDC66-202ENST00000341455 RASSF4Q9H2L5 321 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 SP110Q9HB58 689 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 GDF3Q9NR23 364 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 NLE1Q9NVX2 485 aaPredicted RBP3.48□□□□□ -1.85
CCDC66-202ENST00000341455 SAMD15Q9P1V8 674 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 VPS18Q9P253 973 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 FAM153AQ9UHL3 310 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 SARDHQ9UL12 918 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 PLA2G4CQ9UP65 541 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 ZFR2Q9UPR6 939 aaKnown RBP3.48□□□□□ -1.85
CCDC66-202ENST00000341455 GPR52Q9Y2T5 361 aa3.48□□□□□ -1.85
CCDC66-202ENST00000341455 TMEM131Q92545 1883 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 A0A1W2PPC4 97 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 TCRBV21S2A2A0A5A6 115 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 TBC1D3BA6NDS4 549 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 C16orf96A6NNT2 1141 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 KIAA1324LA8MWY0 1029 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 EIF3FO00303 357 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 DNALI1O14645 258 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 TRIM24O15164 1050 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 WISP3O95389 354 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 CRTAMO95727 393 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 IVLP07476 585 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 KRT10P13645 584 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 NFKB1P19838 968 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 ACTN2P35609 894 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 HMGCLP35914 325 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 STK19P49842 368 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 TMPRSS3P57727 454 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 PLAURQ03405 335 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 PDE1CQ14123 709 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 LLGL1Q15334 1064 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 SF1Q15637 639 aaKnown RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 SLC1A5Q15758 541 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 COLEC12Q5KU26 742 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 ZNF569Q5MCW4 686 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 EMC10Q5UCC4 262 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 LYPLAL1Q5VWZ2 237 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 RWDD4Q6NW29 188 aaKnown RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 WASH2PQ6VEQ5 465 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 CEP128Q6ZU80 1094 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 TFAP2DQ7Z6R9 452 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 HORMAD1Q86X24 394 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 KIF18BQ86Y91 864 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 TP53INP2Q8IXH6 220 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 STK40Q8N2I9 435 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 TRAM1L1Q8N609 369 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 CLRN3Q8NCR9 226 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 FAM156AQ8NDB6 213 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 DDHD1Q8NEL9 900 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 TSTD1Q8NFU3 115 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 PIP4K2CQ8TBX8 421 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 PRCCQ92733 491 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 ISL2Q96A47 359 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 DTD2Q96FN9 168 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 ACOX2Q99424 681 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 MAK16Q9BXY0 300 aaKnown RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 ADGRE3Q9BY15 652 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 NOD2Q9HC29 1040 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 XAB2Q9HCS7 855 aaKnown RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 LZTFL1Q9NQ48 299 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 WASH6PQ9NQA3 447 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 ZDHHC18Q9NUE0 388 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 C2orf42Q9NWW7 574 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 GRHL1Q9NZI5 618 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 PCOLCE2Q9UKZ9 415 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 CORO1CQ9ULV4 474 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 TRAF6Q9Y4K3 522 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 UNC80Q8N2C7 3258 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 GOLGA6L10A0A0M3HER8 536 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 FAM237BA0A1B0GVD1 139 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 PRAMEF26H0Y7S4 382 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 KCNK3O14649 394 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 CHUKO15111 745 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 LDB2O43679 373 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 VEGFDO43915 354 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 SRGAP2O75044 1071 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 LEFTY1O75610 366 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 FGGP02679 453 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 PNLIPP16233 465 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 RBL1P28749 1068 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 ECHS1P30084 290 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 RPL22P35268 128 aaKnown RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 POLD2P49005 469 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 RHOAP61586 193 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 XIAPP98170 497 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 RAD51Q06609 339 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 UGP2Q16851 508 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 USP39Q53GS9 565 aaKnown RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 PPP6R3Q5H9R7 873 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-202ENST00000341455 LRFN4Q6PJG9 635 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 NPNTQ6UXI9 565 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 GCNT7Q6ZNI0 430 aa3.47□□□□□ -1.85
CCDC66-202ENST00000341455 PHLDB2Q86SQ0 1253 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms