RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 NFKB2Q00653 900 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 GRM2Q14416 872 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ZXDCQ2QGD7 858 aaPredicted RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 SLC44A4Q53GD3 710 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 USP45Q70EL2 814 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 LILRA3Q8N6C8 439 aaPredicted RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 HIPK4Q8NE63 616 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 CEP70Q8NHQ1 597 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 RCN3Q96D15 328 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 SAMD11Q96NU1 681 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 MCCC1Q96RQ3 725 aaPredicted RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 HEPHQ9BQS7 1158 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 MEAF6Q9HAF1 191 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 VTI1BQ9UEU0 232 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 CIDEBQ9UHD4 219 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 RPL26L1Q9UNX3 145 aaKnown RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 SORCS3Q9UPU3 1222 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 PPIL1Q9Y3C6 166 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 RWDD3Q9Y3V2 267 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 SCN8AQ9UQD0 1980 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 DOCK9Q9BZ29 2069 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 VPS13AQ96RL7 3174 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 TMEM202A6NGA9 273 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 AGAP14A8MT82 685 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 F8W8V4 182 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 E2F3O00716 465 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ZNF197O14709 1029 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 TM7SF2O76062 418 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ANP32DO95626 131 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 PPARGP37231 505 aaPredicted RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 MAPK8P45983 427 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 RECQLP46063 649 aaPredicted RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 PIK3CGP48736 1102 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 NUDT2P50583 147 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ATXN3P54252 364 aaPredicted RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 DLX2Q07687 328 aaPredicted RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 HSPA14Q0VDF9 509 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 AARS2Q5JTZ9 985 aaKnown RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 GPRC6AQ5T6X5 926 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 METTL21CQ5VZV1 264 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 PAOXQ6QHF9 649 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 LARP4Q71RC2 724 aaKnown RBP eCLIP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 DDIASQ8IXT1 998 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 RBFAQ8N0V3 343 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 AHI1Q8N157 1196 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 STK40Q8N2I9 435 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 NKAPQ8N5F7 415 aaKnown RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 C19orf60Q96EN9 201 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 CHFRQ96EP1 664 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 WRAP53Q9BUR4 548 aaKnown RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 SPATA16Q9BXB7 569 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 MTIF3Q9H2K0 278 aaKnown RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 EML4Q9HC35 981 aaKnown RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 HPS4Q9NQG7 708 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 APPL1Q9UKG1 709 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 PCTPQ9UKL6 214 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ATG2AQ2TAZ0 1938 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 RGSL1A5PLK6 1076 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 OR2AG2A6NM03 316 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 FADS2P1A8MWK0 482 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 KPNA3O00505 521 aaPredicted RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 CFLARO15519 480 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 TAPBPO15533 448 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 HNRNPCL1O60812 293 aaKnown RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 TBX10O75333 385 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 KATNA1O75449 491 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 FGF19O95750 216 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 HSPA7P48741 367 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 PKNOX1P55347 436 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ATP6V0D1P61421 351 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 DUSP6Q16828 381 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 AAK1Q2M2I8 961 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 GRAMD4Q6IC98 578 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 LETMD1Q6P1Q0 360 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 CERS6Q6ZMG9 384 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 RIPOR1Q6ZS17 1223 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ETFBKMTQ8IXQ9 262 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 CLYBLQ8N0X4 340 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 CDYL2Q8N8U2 506 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 FAM156AQ8NDB6 213 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 BPIFB1Q8TDL5 484 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 TWIST2Q8WVJ9 160 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 CMTM5Q96DZ9 223 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ZNF641Q96N77 438 aaPredicted RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 TUBGCP5Q96RT8 1024 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 FAM83CQ9BQN1 747 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 HGH1Q9BTY7 390 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 MARK1Q9P0L2 795 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 SUN2Q9UH99 717 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 HCN2Q9UL51 889 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 VPS9D1Q9Y2B5 631 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 DOCK8Q8NF50 2099 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 KNL1Q8NG31 2342 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 NUMA1Q14980 2115 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 C16orf96A6NNT2 1141 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 SLCO1B7G3V0H7 640 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 K7ESM1 405 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 AZIN1O14977 448 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 CHUKO15111 745 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms