RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TRIM16LQ309B1 348 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 PARP15Q460N3 678 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 TEX26Q8N6G2 289 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 ARRDC2Q8TBH0 407 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 RAB2BQ8WUD1 216 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 ARNT2Q9HBZ2 717 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 PSME2Q9UL46 239 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 ACTL7AQ9Y615 435 aa18.61■□□□□ 0.57
PSPC1-201ENST00000338910 COL4A6Q14031 1691 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 FXYD1O00168 92 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 KPNA4O00629 521 aaPredicted RBP18.6■□□□□ 0.57
PSPC1-201ENST00000338910 AURKAO14965 403 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 ALDOCP09972 364 aaKnown RBP18.6■□□□□ 0.57
PSPC1-201ENST00000338910 RPS9P46781 194 aaKnown RBP18.6■□□□□ 0.57
PSPC1-201ENST00000338910 TUFMP49411 452 aaKnown RBP18.6■□□□□ 0.57
PSPC1-201ENST00000338910 KPNA1P52294 538 aaPredicted RBP18.6■□□□□ 0.57
PSPC1-201ENST00000338910 ADARB1P78563 741 aaKnown RBP18.6■□□□□ 0.57
PSPC1-201ENST00000338910 LRRC26Q2I0M4 334 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 FAM219BQ5XKK7 198 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 NEPROQ6NW34 567 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 SNX19Q92543 992 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 SEMA3CQ99985 751 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 TTLL2Q9BWV7 592 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 RMI1Q9H9A7 625 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 IL1RL2Q9HB29 575 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 FANCEQ9HB96 536 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 GKN1Q9NS71 199 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 IGSF5Q9NSI5 407 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 BACE2Q9Y5Z0 518 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 A0A087X1B8 175 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 A8MT66 165 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 CCL22O00626 93 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 ARPC2O15144 300 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 IPO13O94829 963 aaKnown RBP18.6■□□□□ 0.57
PSPC1-201ENST00000338910 SNAP29O95721 258 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 MT-CO1P00395 513 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 GPIP06744 558 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 FCGR1AP12314 374 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 GFAPP14136 432 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 RFC2P35250 354 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 KPNA2P52292 529 aaKnown RBP18.6■□□□□ 0.57
PSPC1-201ENST00000338910 PLCL1Q15111 1095 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 TECRLQ5HYJ1 363 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 PRMT9Q6P2P2 845 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 DENND1CQ8IV53 801 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 SPNS2Q8IVW8 549 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 MINDY1Q8N5J2 469 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 FATE1Q969F0 183 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 CSF3RQ99062 836 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 MROQ9BYG7 248 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 ATP13A1Q9HD20 1204 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 CMTM6Q9NX76 183 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 FBXO5Q9UKT4 447 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 CPQQ9Y646 472 aa18.6■□□□□ 0.57
PSPC1-201ENST00000338910 ATP6AP2A0A1C7CYW4 349 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 ZNF840PA6NDX5 716 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 MUSKO15146 869 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 ACSL4O60488 711 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 ATP6AP2O75787 350 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 YBEYP58557 167 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-201ENST00000338910 RPS24P62847 133 aaKnown RBP18.59■□□□□ 0.57
PSPC1-201ENST00000338910 GALNT1Q10472 559 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-201ENST00000338910 TUBA3CQ13748 450 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 SIRPB2Q5JXA9 342 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 XAF1Q6GPH4 301 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 KIAA0930Q6ICG6 404 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-201ENST00000338910 OR52K2Q8NGK3 314 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 PRKD2Q9BZL6 878 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-201ENST00000338910 TRAF6Q9Y4K3 522 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 ZFP37Q9Y6Q3 630 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-201ENST00000338910 A0A0J9YYE9 177 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 DYTNA2CJ06 578 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 CCDC162PA2VCL2 907 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 AQP9O43315 295 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 COCHO43405 550 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 SOD2P04179 222 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 IDUAP35475 653 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 STX1BP61266 288 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 YBX1P67809 324 aaKnown RBP18.59■□□□□ 0.57
PSPC1-201ENST00000338910 ZNF789Q5FWF6 425 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 GTF2IRD2BQ6EKJ0 949 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 GTF2IRD2Q86UP8 949 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 C2CD4AQ8NCU7 369 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-201ENST00000338910 ZNF461Q8TAF7 563 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 MAGEE2Q8TD90 523 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-201ENST00000338910 ZNF689Q96CS4 500 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-201ENST00000338910 CCDC126Q96EE4 140 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 TMEM169Q96HH4 297 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 ELMO2Q96JJ3 720 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 ALPK1Q96QP1 1244 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 ZNF347Q96SE7 839 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 VWA7Q9Y334 891 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 MYLKQ15746 1914 aa18.59■□□□□ 0.57
PSPC1-201ENST00000338910 NR5A2O00482 541 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 B4GAT1O43505 415 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 PRAMEF11O60813 436 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 KCNH1O95259 989 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 SLC6A2P23975 617 aa18.58■□□□□ 0.57
PSPC1-201ENST00000338910 MAPKAPK2P49137 400 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms