RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 BMPR1AP36894 532 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 DNAJB13P59910 316 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 ACTR3P61158 418 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 BOP1Q14137 746 aaKnown RBP12.44□□□□□ -0.42
LIMK1-201ENST00000336180 C9orf50Q5SZB4 431 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 FAM91A1Q658Y4 838 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 CCDC149Q6ZUS6 474 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 IFNEQ86WN2 208 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 KYQ8NBH2 561 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 SIKE1Q9BRV8 207 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 EMILIN2Q9BXX0 1053 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 NOL11Q9H8H0 719 aaKnown RBP12.44□□□□□ -0.42
LIMK1-201ENST00000336180 B4GALT6Q9UBX8 382 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 STOML2Q9UJZ1 356 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 COQ6Q9Y2Z9 468 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 OR2AG2A6NM03 316 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 E7ENX8 843 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 F8W8V4 182 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 PRMT5O14744 637 aaPredicted RBP12.44□□□□□ -0.42
LIMK1-201ENST00000336180 NVLO15381 856 aaKnown RBP12.44□□□□□ -0.42
LIMK1-201ENST00000336180 CCNT2O60583 730 aaKnown RBP12.44□□□□□ -0.42
LIMK1-201ENST00000336180 THRAP10827 490 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 RAP1GDS1P52306 607 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 SLC34A1Q06495 639 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 NFATC2Q13469 925 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 ARSIQ5FYB1 569 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 SLC22A9Q8IVM8 553 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 KIAA1191Q96A73 305 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 PBXIP1Q96AQ6 731 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 EBF3Q9H4W6 596 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 STN1Q9H668 368 aaKnown RBP12.44□□□□□ -0.42
LIMK1-201ENST00000336180 INTS10Q9NVR2 710 aaKnown RBP12.44□□□□□ -0.42
LIMK1-201ENST00000336180 PLXNA4Q9HCM2 1894 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 LINC01553A4QN01 128 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 GFRA2O00451 464 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 FBP2O00757 339 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 PABPC1P11940 636 aaKnown RBP12.43□□□□□ -0.42
LIMK1-201ENST00000336180 SERPINA4P29622 427 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 AKT1P31749 480 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 RFC2P35250 354 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 SLC7A9P82251 487 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 MYLK3Q32MK0 819 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 FIBINQ8TAL6 211 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 RSPRY1Q96DX4 576 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 WRAP53Q9BUR4 548 aaKnown RBP12.43□□□□□ -0.42
LIMK1-201ENST00000336180 SYTL2Q9HCH5 934 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 FARSBQ9NSD9 589 aaKnown RBP12.43□□□□□ -0.42
LIMK1-201ENST00000336180 VTI1BQ9UEU0 232 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 V9GYQ6 96 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 OTOL1A6NHN0 477 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-201ENST00000336180 TRPC5OSA6NMA1 111 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 INPP4BO15327 924 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 KERAO60938 352 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 PSMC3P17980 439 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 PBLDP30039 288 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-201ENST00000336180 PBX2P40425 430 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 PPP3CCP48454 512 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 POLD2P49005 469 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 CLCN7P51798 805 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 CACNG1Q06432 222 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 TGFBIQ15582 683 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 UGT3A2Q3SY77 523 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 C1orf53Q5VUE5 145 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 ANKS6Q68DC2 871 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 Q6ZVL8 140 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 FBXW8Q8N3Y1 598 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 LILRA3Q8N6C8 439 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-201ENST00000336180 IRF7Q92985 503 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 MRPS23Q9Y3D9 190 aaKnown RBP12.43□□□□□ -0.42
LIMK1-201ENST00000336180 OAS3Q9Y6K5 1087 aaKnown RBP12.43□□□□□ -0.42
LIMK1-201ENST00000336180 PTPRSQ13332 1948 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 UPK3BL1B0FP48 263 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 UPK3BL2E5RIL1 263 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 WFS1O76024 890 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 BAIAP3O94812 1187 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 PEX2P28328 305 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 RPS6KA2Q15349 733 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 TBCCQ15814 346 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 IZUMO2Q6UXV1 221 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 NET1Q7Z628 596 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-201ENST00000336180 SPATA24Q86W54 205 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 RNF175Q8N4F7 328 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 BHLHE22Q8NFJ8 381 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-201ENST00000336180 OR2T11Q8NH01 316 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 DNAJC9Q8WXX5 260 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 VOPP1Q96AW1 172 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 RAD9AQ99638 391 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 SUV39H2Q9H5I1 410 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 BRD9Q9H8M2 597 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 POLG2Q9UHN1 485 aa12.43□□□□□ -0.42
LIMK1-201ENST00000336180 LEFTY1O75610 366 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 ETV3P41162 512 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 SLC6A11P48066 632 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 AP1S1P61966 158 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 PTSQ03393 145 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 LETMD1Q6P1Q0 360 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 BNC2Q6ZN30 1099 aaPredicted RBP12.42□□□□□ -0.42
LIMK1-201ENST00000336180 RETREG3Q86VR2 466 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 VRK3Q8IV63 474 aa12.42□□□□□ -0.42
LIMK1-201ENST00000336180 ACTRT2Q8TDY3 377 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms