RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 HLA-DQB2P05538 268 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 HIST1H2AGP0C0S8 130 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-201ENST00000334136 CCDC166P0CW27 439 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 HLA-EP13747 358 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 HIST1H2ADP20671 130 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 TNK2Q07912 1038 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 FRG1Q14331 258 aaKnown RBP11.69□□□□□ -0.54
HDAC6-201ENST00000334136 NADK2Q4G0N4 442 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 RHBDF2Q6PJF5 856 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 CROCCP3Q8IVE0 287 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 MMAAQ8IVH4 418 aaKnown RBP11.69□□□□□ -0.54
HDAC6-201ENST00000334136 TSTD1Q8NFU3 115 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 FIBINQ8TAL6 211 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 SH3KBP1Q96B97 665 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 SIPA1Q96FS4 1042 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 HIST1H2AHQ96KK5 128 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 HIST1H2AJQ99878 128 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 H2AFJQ9BTM1 129 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 TBCDQ9BTW9 1192 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 LIN28AQ9H9Z2 209 aaKnown RBP11.69□□□□□ -0.54
HDAC6-201ENST00000334136 RAD18Q9NS91 495 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 PNPLA3Q9NST1 481 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 CACNA2D2Q9NY47 1150 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 TRMT6Q9UJA5 497 aaKnown RBP11.69□□□□□ -0.54
HDAC6-201ENST00000334136 NENFQ9UMX5 172 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 DCLK1O15075 740 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 VPS26AO75436 327 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 AP2A1O95782 977 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 HSMCR30P0CW71 290 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 ZNF7P17097 686 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-201ENST00000334136 TFEBP19484 476 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 GPR1P46091 355 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 IDH3AP50213 366 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 VAC14Q08AM6 782 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 LRRC74AQ0VAA2 488 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 LRRC32Q14392 662 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 EIF4HQ15056 248 aaKnown RBP11.69□□□□□ -0.54
HDAC6-201ENST00000334136 NR6A1Q15406 480 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 RGS21Q2M5E4 152 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 SFT2D3Q587I9 215 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 ARHGAP36Q6ZRI8 547 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 TPRG1Q6ZUI0 275 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 Q7L0L9 218 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 MFSD6LQ8IWD5 586 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 NAT8LQ8N9F0 302 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 HMGB4Q8WW32 186 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 PKMYT1Q99640 499 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 RTKNQ9BST9 563 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 ZFYVE1Q9HBF4 777 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 SSU72Q9NP77 194 aaKnown RBP11.69□□□□□ -0.54
HDAC6-201ENST00000334136 KANSL1LA0AUZ9 987 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 SOBPA7XYQ1 873 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 TK2O00142 265 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 MFN2O95140 757 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 XIAPP98170 497 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 DPYSQ14117 519 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 ARSIQ5FYB1 569 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 EOGTQ5NDL2 527 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 RAET1GQ6H3X3 334 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 C22orf39Q6P5X5 142 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 VITQ6UXI7 678 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-201ENST00000334136 ASRGL1Q7L266 308 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 HORMAD1Q86X24 394 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 CPXM2Q8N436 756 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-201ENST00000334136 ADCY4Q8NFM4 1077 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 FCRL5Q96RD9 977 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 OSBPL11Q9BXB4 747 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 SUV39H2Q9H5I1 410 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 AASDHPPTQ9NRN7 309 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 GIMAP4Q9NUV9 329 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 SLCO3A1Q9UIG8 710 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 ERVW-1Q9UQF0 538 aa11.69□□□□□ -0.54
HDAC6-201ENST00000334136 EDDM13A0A1B0GTR0 161 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 KPNA4O00629 521 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 ARHGEF9O43307 516 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TYROBPO43914 113 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 HS6ST1O60243 411 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 ZBTB11O95625 1053 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 ASGR2P07307 311 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 PBLDP30039 288 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 BMP8BP34820 402 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 STK19P49842 368 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 RAP1GDS1P52306 607 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 DGKEP52429 567 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 DEFA1P59665 94 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 DEFA3P59666 94 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 UGT3A1Q6NUS8 523 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 DOK6Q6PKX4 331 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 CEP68Q76N32 757 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TTC30BQ8N4P2 665 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 FNDC5Q8NAU1 212 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 LPGAT1Q92604 370 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 MFSD3Q96ES6 412 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 GATA5Q9BWX5 397 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 OSGEPL1Q9H4B0 414 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 STN1Q9H668 368 aaKnown RBP11.68□□□□□ -0.54
HDAC6-201ENST00000334136 HPS4Q9NQG7 708 aa11.68□□□□□ -0.54
HDAC6-201ENST00000334136 TMA7Q9Y2S6 64 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms