RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 ZDHHC20Q5W0Z9 365 aa17.66■□□□□ 0.42
ACTB-201ENST00000331789 ACTRT2Q8TDY3 377 aa17.66■□□□□ 0.42
ACTB-201ENST00000331789 AGAP11Q8TF27 550 aa17.66■□□□□ 0.42
ACTB-201ENST00000331789 SCAMP4Q969E2 229 aa17.66■□□□□ 0.42
ACTB-201ENST00000331789 CLPTM1LQ96KA5 538 aa17.66■□□□□ 0.42
ACTB-201ENST00000331789 KCNA7Q96RP8 456 aa17.66■□□□□ 0.42
ACTB-201ENST00000331789 CDCA3Q99618 268 aaPredicted RBP17.66■□□□□ 0.42
ACTB-201ENST00000331789 THTPAQ9BU02 230 aa17.66■□□□□ 0.42
ACTB-201ENST00000331789 SLC28A3Q9HAS3 691 aa17.66■□□□□ 0.42
ACTB-201ENST00000331789 MBD1Q9UIS9 605 aaPredicted RBP17.66■□□□□ 0.42
ACTB-201ENST00000331789 COPG1Q9Y678 874 aaKnown RBP17.66■□□□□ 0.42
ACTB-201ENST00000331789 AZIN1O14977 448 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 FGF4P08620 206 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 ZNF30P17039 623 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 XPAP23025 273 aaPredicted RBP17.65■□□□□ 0.42
ACTB-201ENST00000331789 MNAT1P51948 309 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 FNDC3BQ53EP0 1204 aaKnown RBP17.65■□□□□ 0.42
ACTB-201ENST00000331789 SYCE2Q6PIF2 218 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 TXNDC11Q6PKC3 985 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 SBSNQ6UWP8 590 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 VITQ6UXI7 678 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 Q6ZVL8 140 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 PELI3Q8N2H9 469 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 ZNF483Q8TF39 744 aaPredicted RBP17.65■□□□□ 0.42
ACTB-201ENST00000331789 C3orf30Q96M34 536 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 C1QTNF3Q9BXJ4 246 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 TRPV4Q9HBA0 871 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 CD248Q9HCU0 757 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 PCTPQ9UKL6 214 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 ADAMTS6Q9UKP5 1117 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 SARDHQ9UL12 918 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 DNAJC15Q9Y5T4 150 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 PLXNA2O75051 1894 aa17.65■□□□□ 0.42
ACTB-201ENST00000331789 MAGEC1O60732 1142 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 WFS1O76024 890 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 DGKAP23743 735 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 ETV3P41162 512 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 RGS4P49798 205 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 METAP1P53582 386 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 RALGDSQ12967 914 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 LCP2Q13094 533 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 CUL3Q13618 768 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 DNAL1Q4LDG9 190 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 WASHC2DQ5SRD0 308 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 KANK2Q63ZY3 851 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 FRA10AC1Q70Z53 315 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 DET1Q7L5Y6 550 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 SNX32Q86XE0 403 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 MYO1HQ8N1T3 1032 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 ULK4Q96C45 1275 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 LRIG1Q96JA1 1093 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 PLA2G2FQ9BZM2 168 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 MMADHCQ9H3L0 296 aaPredicted RBP17.64■□□□□ 0.42
ACTB-201ENST00000331789 FAM83DQ9H4H8 585 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 ZBTB26Q9HCK0 441 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 SPATS2LQ9NUQ6 558 aaKnown RBP17.64■□□□□ 0.42
ACTB-201ENST00000331789 THG1LQ9NWX6 298 aaKnown RBP17.64■□□□□ 0.42
ACTB-201ENST00000331789 NUDT4Q9NZJ9 180 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 DKK3Q9UBP4 350 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 EIF2B4Q9UI10 523 aaKnown RBP17.64■□□□□ 0.42
ACTB-201ENST00000331789 TMCO1Q9UM00 188 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 PTGDR2Q9Y5Y4 395 aa17.64■□□□□ 0.42
ACTB-201ENST00000331789 DOCK8Q8NF50 2099 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 IGLV3-16A0A075B6K0 115 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 ATP6AP2A0A1C7CYW4 349 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 ANTXRLA6NF34 631 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 ENTPD5O75356 428 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 ATP6AP2O75787 350 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 HYAL1Q12794 435 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 CHSY3Q70JA7 882 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 DPPA4Q7L190 304 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 PARS2Q7L3T8 475 aaKnown RBP17.64■□□□□ 0.41
ACTB-201ENST00000331789 SCUBE1Q8IWY4 988 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 ARHGAP24Q8N264 748 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 FAM161BQ96MY7 647 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 ZFP14Q9HCL3 533 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 OBP2AQ9NY56 170 aa17.64■□□□□ 0.41
ACTB-201ENST00000331789 MUC22E2RYF6 1773 aaPredicted RBP17.64■□□□□ 0.41
ACTB-201ENST00000331789 KIAA1549LQ6ZVL6 1849 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 RGSL1A5PLK6 1076 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 KPNA3O00505 521 aaPredicted RBP17.63■□□□□ 0.41
ACTB-201ENST00000331789 TM7SF2O76062 418 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 THRAP10827 490 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 PRDX3P30048 256 aaKnown RBP17.63■□□□□ 0.41
ACTB-201ENST00000331789 RAP1GDS1P52306 607 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 GRM2Q14416 872 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 PDGFRLQ15198 375 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 RAB30Q15771 203 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 C9orf64Q5T6V5 341 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 ADAMTSL2Q86TH1 951 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 SYVN1Q86TM6 617 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 KIRREL3Q8IZU9 778 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 WDR60Q8WVS4 1066 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 MRPL38Q96DV4 380 aaKnown RBP17.63■□□□□ 0.41
ACTB-201ENST00000331789 C19orf60Q96EN9 201 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 HGH1Q9BTY7 390 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 RIOK2Q9BVS4 552 aaKnown RBP17.63■□□□□ 0.41
ACTB-201ENST00000331789 LATS2Q9NRM7 1088 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 ITM2BQ9Y287 266 aa17.63■□□□□ 0.41
ACTB-201ENST00000331789 COL4A3Q01955 1670 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms