RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RLN3Q8WXF3 142 aa18.56■□□□□ 0.56
EXOSC3-201ENST00000327304 SIKE1Q9BRV8 207 aa18.56■□□□□ 0.56
EXOSC3-201ENST00000327304 CDH19Q9H159 772 aa18.56■□□□□ 0.56
EXOSC3-201ENST00000327304 POPDC3Q9HBV1 291 aa18.56■□□□□ 0.56
EXOSC3-201ENST00000327304 SGK2Q9HBY8 427 aa18.56■□□□□ 0.56
EXOSC3-201ENST00000327304 SPATA6Q9NWH7 488 aaPredicted RBP18.56■□□□□ 0.56
EXOSC3-201ENST00000327304 TMPRSS11EQ9UL52 423 aa18.56■□□□□ 0.56
EXOSC3-201ENST00000327304 VPS9D1Q9Y2B5 631 aa18.56■□□□□ 0.56
EXOSC3-201ENST00000327304 ZDBF2Q9HCK1 2354 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 DOCK9Q9BZ29 2069 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 FADS2P1A8MWK0 482 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 PFDN6O15212 129 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 TRIM13O60858 407 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 WISP3O95389 354 aaPredicted RBP18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 PMLP29590 882 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 MAT2AP31153 395 aaKnown RBP18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 ARFIP2P53365 341 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 ZNF460Q14592 562 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 FAM83EQ2M2I3 478 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 ZNF284Q2VY69 593 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 SPDYAQ5MJ70 313 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 MAMSTRQ6ZN01 415 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 ZNF765Q7L2R6 523 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 OR2T34Q8NGX1 318 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 NXNL1Q96CM4 212 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 TOE1Q96GM8 510 aaKnown RBP18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 UBXN10Q96LJ8 280 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 LRRC37BQ96QE4 947 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 C1QTNF2Q9BXJ5 285 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 C20orf27Q9GZN8 174 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 KCNK13Q9HB14 408 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 GPAMQ9HCL2 828 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 OXSMQ9NWU1 459 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 KCNK4Q9NYG8 393 aa18.55■□□□□ 0.56
EXOSC3-201ENST00000327304 TRBV5-4A0A0C4DH59 114 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 TMEM114B3SHH9 223 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 K7ESM1 405 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 SEMA4FO95754 770 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 FDXRP22570 491 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 DLG1Q12959 904 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 ITGA9Q13797 1035 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 AGAP9Q5VTM2 703 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 NEK5Q6P3R8 708 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 SERPINA9Q86WD7 417 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 TRAM1L1Q8N609 369 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 CCDC97Q96F63 343 aaPredicted RBP18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 SCYL1Q96KG9 808 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 MRPL57Q9BQC6 102 aaKnown RBP18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 MRPL46Q9H2W6 279 aaKnown RBP18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 CRLS1Q9UJA2 301 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 DCTN4Q9UJW0 460 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 SLC12A4Q9UP95 1085 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 PLXNB3Q9ULL4 1909 aa18.54■□□□□ 0.56
EXOSC3-201ENST00000327304 IGHV1OR15-9A0A0B4J2B8 117 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 A0A0G2JND7 137 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 LRRC72A6NJI9 287 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 AGAP14A8MT82 685 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 ZNF217O75362 1048 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 UBOX5O94941 541 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 FSBPO95073 299 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 SOD1P00441 154 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 LTA4HP09960 611 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 SBK3P0C264 359 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 PGGT1BP53609 377 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 ABCE1P61221 599 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 ACTN3Q08043 901 aaPredicted RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 DMWDQ09019 674 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 WSCD2Q2TBF2 565 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 GPR33Q49SQ1 333 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 LIPMQ5VYY2 423 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 ZNF549Q6P9A3 640 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 PPP4R1Q8TF05 950 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 AARSD1Q9BTE6 412 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 ZSCAN5AQ9BUG6 496 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 IGSF5Q9NSI5 407 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 WSB2Q9NYS7 404 aaPredicted RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 CRYL1Q9Y2S2 319 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 CACNA1IQ9P0X4 2223 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 TK2O00142 265 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 MYO1CO00159 1063 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 PAK4O96013 591 aaPredicted RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 CD6P30203 668 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 OXTRP30559 389 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 SCTRP47872 440 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 TTPAP49638 278 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 CDKN2DP55273 166 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 DPTQ07507 201 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 ASPHQ12797 758 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 BNIP1Q12981 228 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 AGERQ15109 404 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 SPRED3Q2MJR0 410 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 MAP7D1Q3KQU3 841 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 SETMARQ53H47 684 aaPredicted RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 AARS2Q5JTZ9 985 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 KLC3Q6P597 504 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 TSSK4Q6SA08 328 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 TRIM69Q86WT6 500 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 WDR75Q8IWA0 830 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 NXPE1Q8N323 547 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 TMEM105Q8N8V8 129 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms