RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 SAE1Q9UBE0 346 aaPredicted RBP17.41■□□□□ 0.38
PTPMT1-201ENST00000326656 EPHA6Q9UF33 1036 aa17.41■□□□□ 0.38
PTPMT1-201ENST00000326656 TMPRSS11EQ9UL52 423 aa17.41■□□□□ 0.38
PTPMT1-201ENST00000326656 LCA5LO95447 670 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 BRAFP15056 766 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 NFKB1P19838 968 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 HALP42357 657 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 CSRP3P50461 194 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 DMPKQ09013 629 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 MPP3Q13368 585 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 XRCC4Q13426 336 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 CLCA4Q14CN2 919 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 SIRPB2Q5JXA9 342 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 TIPARPQ7Z3E1 657 aaKnown RBP17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 C11orf96Q7Z7L8 435 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 TTC30BQ8N4P2 665 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 ESX1Q8N693 406 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 RBM41Q96IZ5 413 aaKnown RBP17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 ZNF514Q96K75 400 aaPredicted RBP17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 ZNF768Q9H5H4 540 aaKnown RBP17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 LUC7LQ9NQ29 371 aaKnown RBP17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 KLHL8Q9P2G9 620 aaPredicted RBP17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 KLHL3Q9UH77 587 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 DNAJC16Q9Y2G8 782 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 HYOU1Q9Y4L1 999 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 SLC30A1Q9Y6M5 507 aa17.4■□□□□ 0.38
PTPMT1-201ENST00000326656 KLHL33A6NCF5 533 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 MTX2O75431 263 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 DLGAP3O95886 979 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 PECAM1P16284 738 aaPredicted RBP17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 TYRP1P17643 537 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 SPAM1P38567 509 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 ITGA9Q13797 1035 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 SLC1A5Q15758 541 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 PPP2R5EQ16537 467 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 KHDC1Q4VXA5 237 aaKnown RBP17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 KAZNQ674X7 775 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 KLHL35Q6PF15 583 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 B4GALNT4Q76KP1 1039 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 PRSS42Q7Z5A4 293 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 ZC3H18Q86VM9 953 aaKnown RBP17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 AMZ2Q86W34 360 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 TRAPPC5Q8IUR0 188 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 CCDC170Q8IYT3 715 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 ZNF567Q8N184 647 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 GDAP1Q8TB36 358 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 CXorf40BQ96DE9 158 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 MRGPRX2Q96LB1 330 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 FERMT1Q9BQL6 677 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 APMAPQ9HDC9 416 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 BPIFA1Q9NP55 256 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 IL17BQ9UHF5 180 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 EFR3BQ9Y2G0 817 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 PKP3Q9Y446 797 aa17.39■□□□□ 0.37
PTPMT1-201ENST00000326656 hCG_1818297A0A087WSY0 165 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 LOC101059948A0A1B0GTJ6 334 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 TERTO14746 1132 aaKnown RBP17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 RPL10P27635 214 aaKnown RBP17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 CAPZBP47756 277 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 GFERP55789 205 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 POLE2P56282 527 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 COPS2P61201 443 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 PLA2G4EQ3MJ16 856 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 C11orf63Q6NUN7 778 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 BBS12Q6ZW61 710 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 BEND7Q8N7W2 519 aaPredicted RBP17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 DDHD1Q8NEL9 900 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 ZFPM2Q8WW38 1151 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 KLHL6Q8WZ60 621 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 OXNAD1Q96HP4 312 aaPredicted RBP17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 TGM7Q96PF1 710 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 QKIQ96PU8 341 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 SMOXQ9NWM0 555 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 SEMA5BQ9P283 1151 aa17.38■□□□□ 0.37
PTPMT1-201ENST00000326656 GLYATL1P3A0A0U1RQE8 302 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 GOLGA6L3A6NEY3 463 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 APOC4-APOC2K7ER74 178 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 POP7O75817 140 aaKnown RBP17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 ANXA9O76027 345 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 APOC2P02655 101 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 FGF5P12034 268 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 STAT5AP42229 794 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 FOXM1Q08050 763 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 ADCY2Q08462 1091 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 KCNAB2Q13303 367 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 GPR18Q14330 331 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 SPA17Q15506 151 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 CHRNA6Q15825 494 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 SEPT7Q16181 437 aaKnown RBP17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 FAM182AQ5T1J6 154 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 SARM1Q6SZW1 724 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 GLT6D1Q7Z4J2 308 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 BPHLQ86WA6 291 aaPredicted RBP17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 FCRL4Q96PJ5 515 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 C19orf43Q9BQ61 176 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 FSD1LQ9BXM9 530 aa17.37■□□□□ 0.37
PTPMT1-201ENST00000326656 OR52A4PA6NMU1 304 aa17.36■□□□□ 0.37
PTPMT1-201ENST00000326656 NKX2-8O15522 239 aa17.36■□□□□ 0.37
PTPMT1-201ENST00000326656 ZNF189O75820 626 aaPredicted RBP17.36■□□□□ 0.37
PTPMT1-201ENST00000326656 RASSF9O75901 435 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms